RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 NECTIN3Q9NQS3 549 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 SNX12Q9UMY4 172 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 SLC22A14Q9Y267 594 aa16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 ANKRD17O75179 2603 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-202ENST00000394082 C19orf84I3L1E1 186 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 BANF1O75531 89 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 B3GALT4O96024 378 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 SNRPB2P08579 225 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 GNAZP19086 355 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 HPDP32754 393 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 HSD17B7P56937 341 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 RIPPLY3P57055 190 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 RAB8AP61006 207 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 SYDE1Q6ZW31 735 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 FGD2Q7Z6J4 655 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 TMPRSS11BQ86T26 416 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 SCUBE1Q8IWY4 988 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 FAM57AQ8TBR7 257 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 GAL3ST3Q96A11 431 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 PLSCR2Q9NRY7 297 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 COQ3Q9NZJ6 369 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 OARD1Q9Y530 152 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 TEX264Q9Y6I9 313 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 POLQO75417 2590 aa16.33■□□□□ 0.2
SNRPA1-202ENST00000394082 A0A088AWK7 358 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 CTAGE15A4D2H0 777 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 ZNF10P21506 573 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 PTGS2P35354 604 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 ELK3P41970 407 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 ST13P50502 369 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 GPR143P51810 404 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 CBLBQ13191 982 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 RBBP5Q15291 538 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 TRMT10BQ6PF06 316 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 CTAGE6Q86UF2 777 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 SULF2Q8IWU5 870 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 GPALPP1Q8IXQ4 340 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 CA5BP1Q8WTZ4 195 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 VMP1Q96GC9 406 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 CAPS2Q9BXY5 557 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 AICDAQ9GZX7 198 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 DDX47Q9H0S4 455 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 KLHL31Q9H511 634 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 NT5DC2Q9H857 520 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 SLC17A6Q9P2U8 582 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 IKZF3Q9UKT9 509 aa16.32■□□□□ 0.2
SNRPA1-202ENST00000394082 F8P00451 2351 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 HIVEP1P15822 2718 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 LRIT2A6NDA9 550 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 CLDN4O14493 209 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 TFECO14948 347 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 PEX1O43933 1283 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 H2AFYO75367 372 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 C1GALT1C1LP0DN25 315 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 PTGER1P34995 402 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 HNF4AP41235 474 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 MEOX1P50221 254 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 HSF1Q00613 529 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 TMEM211Q6ICI0 200 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 TMIGD1Q6UXZ0 262 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 ADAMTSL2Q86TH1 951 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 CEP97Q8IW35 865 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 CYP4Z2PQ8N1L4 340 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 TMEM156Q8N614 296 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 FAR2Q96K12 515 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 POPDC3Q9HBV1 291 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 PPT2Q9UMR5 302 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 YARS2Q9Y2Z4 477 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 CLDN16Q9Y5I7 305 aa16.31■□□□□ 0.2
SNRPA1-202ENST00000394082 CCDC168Q8NDH2 2452 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 TRBV11-1A0A0K0K1C0 115 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 C4orf51C9J302 202 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ITGA10O75578 1167 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 CLEC3AO75596 197 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 MYO1DO94832 1006 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 SLC6A12P48065 614 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 PGGT1BP53609 377 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 BTN3A2P78410 334 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 MGAT5Q09328 741 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ADPRMQ3LIE5 342 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 CMPK2Q5EBM0 449 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 TOR1AIP1Q5JTV8 583 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 CDKL4Q5MAI5 379 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 SLCO4C1Q6ZQN7 724 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ZNF595Q8IYB9 648 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 SLC35F6Q8N357 371 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ASB5Q8WWX0 329 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 MS4A6EQ96DS6 147 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 WDR83Q9BRX9 315 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 MCCC2Q9HCC0 563 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ADAP2Q9NPF8 381 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 TIMMDC1Q9NPL8 285 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 NSMCE4AQ9NXX6 385 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms