RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 FIBINQ8TAL6 211 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 NUDT8Q8WV74 236 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 COL21A1Q96P44 957 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 CHCHD6Q9BRQ6 235 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 TRPV4Q9HBA0 871 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 KRT84Q9NSB2 600 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 C1orf109Q9NX04 203 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 V9GYH0 126 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 OR6C70A6NIJ9 312 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SEC14L5O43304 696 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 KIAA0513O60268 411 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 ZNF821O75541 412 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 OR4F21O95013 312 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 CFL1P23528 166 aaKnown RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 GKP32189 559 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SOX9P48436 509 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 AGTR2P50052 363 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 TFF2Q03403 129 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 IL10RBQ08334 325 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 HYAL2Q12891 473 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 ASAH1Q13510 395 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PTPRRQ15256 657 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 RBBP7Q16576 425 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 BAK1Q16611 211 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 TIMM50Q3ZCQ8 353 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 FBXO48Q5FWF7 155 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 MPP7Q5T2T1 576 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 FAM205BPQ63HN1 556 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 FAHD1Q6P587 224 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PAQR3Q6TCH7 311 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 VWA5B2Q8N398 1253 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 DNAJC22Q8N4W6 341 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 GGHQ92820 318 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 CRELD1Q96HD1 420 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 SLC22A4Q9H015 551 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PRDM6Q9NQX0 595 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 B3GNT2Q9NY97 397 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PDP1Q9P0J1 537 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 KLHL20Q9Y2M5 609 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PCDHGA6Q9Y5G7 932 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 CCDC182A6NF36 153 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 CCL22O00626 93 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PDPK1O15530 556 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 TRIM3O75382 744 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 ADORA3P0DMS8 318 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 ACADMP11310 421 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SCN1BQ07699 218 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 GTF2H3Q13889 308 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SEMA3AQ14563 771 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 TSNQ15631 228 aaKnown RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 ZNF79Q15937 498 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 AP5B1Q2VPB7 878 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 SETMARQ53H47 684 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 ATXN7L2Q5T6C5 722 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 GCNT7Q6ZNI0 430 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 RNF165Q6ZSG1 346 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 RNF130Q86XS8 419 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 GLB1L3Q8NCI6 653 aaPredicted RBP10.7□□□□□ -0.7
CUX1-204ENST00000393824 OR4M1Q8NGD0 313 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 WDFY2Q96P53 400 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 ZBTB18Q99592 522 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 TM6SF2Q9BZW4 377 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 MMP28Q9H239 520 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 MTG2Q9H4K7 406 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 IL20Q9NYY1 176 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 IKZF3Q9UKT9 509 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 SNX7Q9UNH6 387 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 ABCG2Q9UNQ0 655 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 POLHQ9Y253 713 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 KCTD3Q9Y597 815 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 PCM1Q15154 2024 aa10.7□□□□□ -0.7
CUX1-204ENST00000393824 DENND4AQ7Z401 1863 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 E2F3O00716 465 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 TFECO14948 347 aaPredicted RBP10.69□□□□□ -0.7
CUX1-204ENST00000393824 STX7O15400 261 aaKnown RBP10.69□□□□□ -0.7
CUX1-204ENST00000393824 C1QBP02746 253 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 IL6P05231 212 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 ZNF30P17039 623 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 MYL9P24844 172 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 GNPDA1P46926 289 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 ERVPABLB-1P60509 514 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 CD83Q01151 205 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 CAMK2GQ13555 558 aaPredicted RBP10.69□□□□□ -0.7
CUX1-204ENST00000393824 EIF4HQ15056 248 aaKnown RBP10.69□□□□□ -0.7
CUX1-204ENST00000393824 LETMD1Q6P1Q0 360 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 KCTD20Q7Z5Y7 419 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 ETFBKMTQ8IXQ9 262 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 ZNF366Q8N895 744 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 VPS37AQ8NEZ2 397 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 CYB5D2Q8WUJ1 264 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 ASB15Q8WXK1 588 aa10.69□□□□□ -0.7
CUX1-204ENST00000393824 PMEPA1Q969W9 287 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms