RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RGS7P49802 495 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 GMPSP49915 693 aaPredicted RBP2.36□□□□□ -2.03
TRAV40-201ENST00000390467 IGLV3-21P80748 117 aaPredicted RBP2.36□□□□□ -2.03
TRAV40-201ENST00000390467 TIMM50Q3ZCQ8 353 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 CST9LP1Q5W188 147 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 PPP1R21Q6ZMI0 780 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 MACC1Q6ZN28 852 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 RAPH1Q70E73 1250 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 LRRC49Q8IUZ0 686 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 NAXDQ8IW45 347 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 KCTD6Q8NC69 237 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 CD99L2Q8TCZ2 262 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 FAM129AQ9BZQ8 928 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 SLC39A8Q9C0K1 460 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 LIME1Q9H400 295 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 ST6GALNAC4Q9H4F1 302 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 C5AR2Q9P296 337 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 Q9UF83 564 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 UBQLN2Q9UHD9 624 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 KLK4Q9Y5K2 254 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 COL4A4P53420 1690 aaPredicted RBP2.36□□□□□ -2.03
TRAV40-201ENST00000390467 TRAV18A0A075B6X5 111 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 FAM220BPB1ANY3 271 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 KBTBD11O94819 623 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 FYNP06241 537 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 CTNNA2P26232 953 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 MFAP3P55082 362 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 LTB4RQ15722 352 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 ECSCRQ19T08 205 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 SLC22A6Q4U2R8 563 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 RSBN1Q5VWQ0 802 aaPredicted RBP2.35□□□□□ -2.03
TRAV40-201ENST00000390467 PAMR1Q6UXH9 720 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 BRINP3Q76B58 766 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 GPR141Q7Z602 305 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 CROCCP3Q8IVE0 287 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 BANPQ8N9N5 519 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 CAMKVQ8NCB2 501 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 OR6J1Q8NGC5 347 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 OR1B1Q8NGR6 318 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 GTSF1Q8WW33 167 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 RMDN2Q96LZ7 410 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 MGME1Q9BQP7 344 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 PLEKHA3Q9HB20 300 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 THYN1Q9P016 225 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 ARMCX1Q9P291 453 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 LIPGQ9Y5X9 500 aa2.35□□□□□ -2.03
TRAV40-201ENST00000390467 TEX48A0A1B0GUV7 120 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 IGLON5A6NGN9 336 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 UBE2CO00762 179 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 CDX4O14627 284 aaPredicted RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 PGRMC2O15173 223 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 UMPSP11172 480 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 HLCSP50747 726 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 IST1P53990 364 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 PEX3P56589 373 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 AIMP1Q12904 312 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 PCK2Q16822 640 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 FAM174BQ3ZCQ3 159 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 LRRC73Q5JTD7 316 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 NEPROQ6NW34 567 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 CFAP161Q6P656 301 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 TMEM64Q6YI46 380 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 C15orf52Q6ZUT6 534 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 ZNRF1Q8ND25 227 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 MRPS27Q92552 414 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 NUS1Q96E22 293 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 RCHY1Q96PM5 261 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 ALKBH3Q96Q83 286 aaPredicted RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 SLF1Q9BQI6 1058 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 NUDT16L1Q9BRJ7 211 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 PINK1Q9BXM7 581 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 DPEP2Q9H4A9 486 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 RPF1Q9H9Y2 349 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
TRAV40-201ENST00000390467 DBF4Q9UBU7 674 aaPredicted RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 NIP7Q9Y221 180 aaKnown RBP eCLIP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 RUVBL2Q9Y230 463 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 MRPL11Q9Y3B7 192 aaKnown RBP2.34□□□□□ -2.03
TRAV40-201ENST00000390467 TRAV9-2A0A087WT02 112 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 TMEM150CB9EJG8 249 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 TCP10L2B9ZVM9 353 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 FBP2O00757 339 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 LUC7L3O95232 432 aaKnown RBP2.33□□□□□ -2.04
TRAV40-201ENST00000390467 DLATP10515 647 aaKnown RBP2.33□□□□□ -2.04
TRAV40-201ENST00000390467 CDX1P47902 265 aaPredicted RBP2.33□□□□□ -2.04
TRAV40-201ENST00000390467 BACE1P56817 501 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 RPS27AP62979 156 aaKnown RBP2.33□□□□□ -2.04
TRAV40-201ENST00000390467 MAPK11Q15759 364 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 KRBOX4Q5JUW0 171 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 MARC1Q5VT66 337 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 OLFML2AQ68BL7 652 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 TCEAL6Q6IPX3 200 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF770Q6IQ21 691 aaPredicted RBP2.33□□□□□ -2.04
TRAV40-201ENST00000390467 RFWD3Q6PCD5 774 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 TICAM2Q86XR7 235 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 LIPHQ8WWY8 451 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 SLC25A23Q9BV35 468 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms