RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ARRDC2Q8TBH0 407 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 QRFPRQ96P65 431 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 HDHD5Q9BXW7 423 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 HEBP1Q9NRV9 189 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 L7N2F9 121 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 EEF1E1O43324 174 aaKnown RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 S100A6P06703 90 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 DNASE1P24855 282 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 CCDC58Q4VC31 144 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 ALKAL1Q6UXT8 129 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 GATAD2BQ8WXI9 593 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 VMP1Q96GC9 406 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 YIPF4Q9BSR8 244 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 ASF1AQ9Y294 204 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 HLA-DPB1P04440 258 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 FCER2P06734 321 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 Q6ZSR9 355 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 SNX18Q96RF0 628 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 SPATA9Q9BWV2 254 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 BRINP2Q9C0B6 783 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 ZDHHC3Q9NYG2 299 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 FXYD6-FXYD2A0A087WZ82 144 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 CLDN24A6NM45 220 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 DSTNP60981 165 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 RAB8AP61006 207 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 PPP2R2BQ00005 443 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 POU4F3Q15319 338 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 TCEA2Q15560 299 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 USP41Q3LFD5 358 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 BCL2L15Q5TBC7 163 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 ZNF280BQ86YH2 543 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 SAMD12Q8N8I0 201 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 ATP6V1C2Q8NEY4 427 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 NEIL3Q8TAT5 605 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 FXYD6Q9H0Q3 95 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 DUSP11O75319 330 aaKnown RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 NFATC2Q13469 925 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 C9orf64Q5T6V5 341 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 MDGA1Q8NFP4 955 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 BRI3BPQ8WY22 251 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 RAB8BQ92930 207 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 FUZQ9BT04 418 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 MRPL17Q9NRX2 175 aaKnown RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 HCN3Q9P1Z3 774 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 UTS2RQ9UKP6 389 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 NUP50Q9UKX7 468 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 A0A0G2JN53 185 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 FGBP02675 491 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ANXA3P12429 323 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 DAPP51397 102 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 CRISP1P54107 249 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ISL1P61371 349 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ARL14EPQ8N8R7 260 aaPredicted RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 ZNF548Q8NEK5 533 aaPredicted RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 HYLS1Q96M11 299 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 FYTTD1Q96QD9 318 aaKnown RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 CFAP97Q9P2B7 532 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 SAGP10523 405 aaPredicted RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 EVI2BP34910 448 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 CDK10Q15131 360 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 PCBP2Q15366 365 aaKnown RBP eCLIP13.72□□□□□ -0.216e-8■■■■□ 21.2
RTF1-201ENST00000389629 CEACAM20Q6UY09 585 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ZNF438Q7Z4V0 828 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 COMMD7Q86VX2 200 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 OXR1Q8N573 874 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 NELL2Q99435 816 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 TTLL2Q9BWV7 592 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 TBC1D24Q9ULP9 559 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 STUB1Q9UNE7 303 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 CDK1P06493 297 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 MTHFD2P13995 350 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 LCN1P31025 176 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 HNMTP50135 292 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
RTF1-201ENST00000389629 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 GINS1Q14691 196 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 TATDN3Q17R31 274 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 GDPD3Q7L5L3 318 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 KLHL36Q8N4N3 616 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms