RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 HOXC5Q00444 222 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 TYSND1Q2T9J0 566 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 PJA1Q8NG27 643 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 AARSD1Q9BTE6 412 aaKnown RBP11.12□□□□□ -0.63
PITRM1-202ENST00000380989 KAT8Q9H7Z6 458 aaKnown RBP11.12□□□□□ -0.63
PITRM1-202ENST00000380989 A0A1W2PPC1 479 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 TRIM16O95361 564 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 MMP12P39900 470 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 OR1E2P47887 323 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 POLR2LP62875 67 aaKnown RBP11.12□□□□□ -0.63
PITRM1-202ENST00000380989 B4GALNT1Q00973 533 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 CPSF6Q16630 551 aaKnown RBP eCLIP11.12□□□□□ -0.63
PITRM1-202ENST00000380989 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 LIPIQ6XZB0 460 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 DTX3Q8N9I9 347 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 RPLP0P6Q8NHW5 317 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 EBPLQ9BY08 206 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 IRF2BPLQ9H1B7 796 aa11.12□□□□□ -0.63
PITRM1-202ENST00000380989 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 METTL15A6NJ78 407 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 CPNE3O75131 537 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 SEC22BO75396 215 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 SEMA3DO95025 777 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PRNPP04156 253 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PGRP06401 933 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 UROSP10746 265 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 VIPR1P32241 457 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PIK3CBP42338 1070 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 NFKB2Q00653 900 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 CACNG1Q06432 222 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 BAK1Q16611 211 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 ZCCHC8Q6NZY4 707 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PRR23CQ6ZRP0 262 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 ENTHD1Q8IYW4 607 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 KIAA1191Q96A73 305 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 LYSMD1Q96S90 227 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 IPPKQ9H8X2 491 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PPIL1Q9Y3C6 166 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 FAM227AF5H4B4 570 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 NAT1P18440 290 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PWP1Q13610 501 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 TIGD6Q17RP2 521 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 TBRG1Q3YBR2 411 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 NEK5Q6P3R8 708 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 GOLGA7Q7Z5G4 137 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 BCDIN3DQ7Z5W3 292 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 GPSM1Q86YR5 675 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 GANCQ8TET4 914 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 DEPDC7Q96QD5 511 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 UGT2B28Q9BY64 529 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 DUSP21Q9H596 190 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PRM3Q9NNZ6 103 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 GIMAP4Q9NUV9 329 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 RNF6Q9Y252 685 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PCDHGB6Q9Y5F9 930 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 A0A1W2PQF6 199 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 OR2A25A4D2G3 310 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 H7C0S8 307 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 AKR7A2O43488 359 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 SYT6Q5T7P8 510 aaPredicted RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 DOK6Q6PKX4 331 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 PHF10Q8WUB8 498 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 REXO5Q96IC2 774 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 COPS4Q9BT78 406 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 NUAK2Q9H093 628 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 EXOSC4Q9NPD3 245 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 KIF17Q9P2E2 1029 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 ZNF221Q9UK13 617 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 NAALAD2Q9Y3Q0 740 aa11.11□□□□□ -0.63
PITRM1-202ENST00000380989 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
PITRM1-202ENST00000380989 OR2AG2A6NM03 316 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 NTRK1P04629 796 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 HTR3AP46098 478 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 TAS2R38P59533 333 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 FOXM1Q08050 763 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 MAD2L1BPQ15013 274 aaPredicted RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 SNX20Q7Z614 316 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 PEX13Q92968 403 aa11.1□□□□□ -0.63
PITRM1-202ENST00000380989 FAM120BQ96EK7 910 aaKnown RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
PITRM1-202ENST00000380989 NECTIN3Q9NQS3 549 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms