RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CRB1P82279 1406 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SLC19A2O60779 497 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 MYLK3Q32MK0 819 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 FANK1Q8TC84 345 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CRHBPP24387 322 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 NR4A2P43354 598 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 DAGLBQ8NCG7 672 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 HS6ST2Q96MM7 605 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 DUSP26Q9BV47 211 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CNTN3Q9P232 1028 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 FTCDNL1E5RQL4 147 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 TNFSF4P23510 183 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CDK2P24941 298 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 TNFSF9P41273 254 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 KLF10Q13118 480 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GSG1LQ6UXU4 331 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 SORCS1Q8WY21 1168 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ASF1BQ9NVP2 202 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 HCRTR2O43614 444 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 LIASO43766 372 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 LILRB3O75022 631 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 NTSR2O95665 410 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CAV2P51636 162 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 SLC30A8Q8IWU4 369 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 NFKBIDQ8NI38 313 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 SLC22A18Q96BI1 424 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF536O15090 1300 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 AGPAT2O15120 278 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PEX10O60683 326 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 BDKRB2P30411 391 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ASPAP45381 313 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CPNE9Q8IYJ1 553 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PLEKHO2Q8TD55 490 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GOLGA2P5Q9HBQ8 144 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 NUDT4Q9NZJ9 180 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 NEO1Q92859 1461 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GLSO94925 669 aaPredicted RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GBAP04062 536 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 DSTNP60981 165 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 DSC2Q02487 901 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PTPRRQ15256 657 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ACMSDQ8TDX5 336 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ZDHHC9Q9Y397 364 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 TLX2O43763 284 aaPredicted RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 RBBP9O75884 186 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 POP4O95707 220 aaKnown RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 KNG1P01042 644 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 SLC6A6P31641 620 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 VGLL4Q14135 290 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 GLT8D1Q68CQ7 371 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 MEX3BQ6ZN04 569 aaKnown RBP12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ECHDC3Q96DC8 303 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
HIPK3-202ENST00000379016 IRF6O14896 467 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PI15O43692 258 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CLDN11O75508 207 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GOT2P00505 430 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 C8GP07360 202 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ARHGAP19Q14CB8 494 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 PPM1JQ5JR12 505 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 GKN2Q86XP6 184 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 NXF5Q9H1B4 397 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 FZD4Q9ULV1 537 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ANXA7P20073 488 aaKnown RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 SLBPQ14493 270 aaKnown RBP eCLIP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 Q1RN00 199 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ITPRIPL2Q3MIP1 535 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 RIC1Q4ADV7 1423 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 KIAA0895LQ68EN5 471 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 ACOT11Q8WXI4 607 aaPredicted RBP12.84□□□□□ -0.35
HIPK3-202ENST00000379016 CAMK1GQ96NX5 476 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms