RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TRPV4Q9HBA0 871 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 MAPRE3Q9UPY8 281 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 GOLGA4Q13439 2230 aaKnown RBP18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 RPA4Q13156 261 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 CDK5R2Q13319 367 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 PDE7AQ13946 482 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 SCARB2Q14108 478 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 SKIV2LQ15477 1246 aaKnown RBP18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 IQCCQ4KMZ1 466 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 FGD3Q5JSP0 725 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 KDM4DQ6B0I6 523 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 ADGRF3Q8IZF5 1079 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 LINC01555Q8NAE3 123 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 SMYD1Q8NB12 490 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 UCN3Q969E3 161 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 UBE2E3Q969T4 207 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 CXorf40BQ96DE9 158 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 INSM2Q96T92 566 aaPredicted RBP18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 DOHHQ9BU89 302 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 KRT84Q9NSB2 600 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 TMEM184CQ9NVA4 438 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 OBP2AQ9NY56 170 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 TAS2R9Q9NYW1 312 aa18.39■□□□□ 0.53
PCDHA4-201ENST00000378125 DENND4AQ7Z401 1863 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 SLC16A6O15403 523 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 TNFRSF21O75509 655 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 ITGA1P56199 1179 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 BIRC2Q13490 618 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 GCNT6Q5T4J0 391 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 LAIR1Q6GTX8 287 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 SYCE2Q6PIF2 218 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 TSEN54Q7Z6J9 526 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 TTC29Q8NA56 475 aaPredicted RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 MACROD1Q9BQ69 325 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 RHNO1Q9BSD3 238 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 MENTQ9BUN1 341 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 RSPH9Q9H1X1 276 aaPredicted RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 TRIT1Q9H3H1 467 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 RASSF1Q9NS23 344 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 GMPPBQ9Y5P6 360 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 DOCK8Q8NF50 2099 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 OR52A4PA6NMU1 304 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 M0QX08 132 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 KMOO15229 486 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 PPM1DO15297 605 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 OR1F1O43749 312 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 CPNE6O95741 557 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 CD247P20963 164 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 DCKP27707 260 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 GALK1P51570 392 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 MAPK12P53778 367 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 SMN1Q16637 294 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 RFX4Q33E94 735 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 KHDRBS2Q5VWX1 349 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 Q6ZPB1 254 aaPredicted RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 ALDH16A1Q8IZ83 802 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 OR52N2Q8NGI0 321 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 OR13F1Q8NGS4 319 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 OR14C36Q8NHC7 312 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 GOT1L1Q8NHS2 421 aaPredicted RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 POP5Q969H6 163 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 TAMM41Q96BW9 452 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 GABARAPL1Q9H0R8 117 aa18.38■□□□□ 0.53
PCDHA4-201ENST00000378125 A0A1W2PPV9 198 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 LCMT2O60294 686 aaKnown RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 ANGPTL1O95841 491 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 SELENOWP63302 87 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 MLF2Q15773 248 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 SLC44A2Q8IWA5 706 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 AMER3Q8N944 861 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 AIF1LQ9BQI0 150 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 TEX101Q9BY14 249 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 ZNF717Q9BY31 904 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 CXorf36Q9H7Y0 433 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 SLAMF7Q9NQ25 335 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 C1GALT1Q9NS00 363 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 SNX11Q9Y5W9 270 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 J3KTA2 159 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 ITGAMP11215 1152 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 HOXB6P17509 224 aaKnown RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 FUT4P22083 530 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 TEAD4Q15561 434 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 DEPDC1Q5TB30 811 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 JPH3Q8WXH2 748 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 SPATA9Q9BWV2 254 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 FBXL12Q9NXK8 326 aa18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 WARS2Q9UGM6 360 aaKnown RBP18.37■□□□□ 0.53
PCDHA4-201ENST00000378125 PRAMEF25A6NGN4 478 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 UGT2B11O75310 529 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 RPN2P04844 631 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 CCR8P51685 355 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 COL9A2Q14055 689 aaPredicted RBP18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 C10orf62Q5T681 223 aaPredicted RBP18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 B3GNT8Q7Z7M8 397 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 OXR1Q8N573 874 aa18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 EZH1Q92800 747 aaPredicted RBP18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 EXOSC8Q96B26 276 aaKnown RBP18.36■□□□□ 0.53
PCDHA4-201ENST00000378125 MS4A8Q9BY19 250 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms