RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 DLGAP4Q9Y2H0 992 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 PCDHB11Q9Y5F2 797 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 METTL21EPA6NDL7 271 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 EIF3FO00303 357 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 TLL1O43897 1013 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TFPIP10646 304 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 DCKP27707 260 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ARHGDIBP52566 201 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CDKN2DP55273 166 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 WNT7BP56706 349 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 RPS3AP61247 264 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 RPS13P62277 151 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 SEMG2Q02383 582 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CLEC12AQ5QGZ9 265 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 PGBD2Q6P3X8 592 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 NCEH1Q6PIU2 408 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 IQCHQ86VS3 1027 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ASCC1Q8N9N2 400 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 ZNF461Q8TAF7 563 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TFGQ92734 400 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 SRMSQ9H3Y6 488 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 NLGN3Q9NZ94 848 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TMEM181Q9P2C4 612 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 MARCH4Q9P2E8 410 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CHD7Q9P2D1 2997 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 LRRC72A6NJI9 287 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CPNE3O75131 537 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 BEST1O76090 585 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 UBXN7O94888 489 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 C6orf47O95873 294 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TFPTP0C1Z6 253 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 GSTT2P0CG29 244 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 UQCRC2P22695 453 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ACADLP28330 430 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 GCAP28676 217 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CD40LGP29965 261 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ERP29P30040 261 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 CBX5P45973 191 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 MAZP56270 477 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 CREB5Q02930 508 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ZNF33BQ06732 778 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 LRRC32Q14392 662 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 PON2Q15165 354 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 UPP1Q16831 310 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 MARCH8Q5T0T0 291 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 C22orf39Q6P5X5 142 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 FAM43BQ6ZT52 329 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 PRSS48Q7RTY5 328 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 OR9A1PQ8NGU1 263 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ARNTL2Q8WYA1 636 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 FAM129BQ96TA1 746 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CD180Q99467 661 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 OR2B2Q9GZK3 357 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 IRF2BPLQ9H1B7 796 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 HSPB11Q9Y547 144 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 A0A1W2PRQ8 180 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 SOBPA7XYQ1 873 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 NOTOA8MTQ0 251 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 FAAHO00519 579 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 PRODHO43272 600 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 ERI3O43414 337 aaKnown RBP8.09□□□□□ -1.12
VPS36-201ENST00000378060 MTX2O75431 263 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 GABBR2O75899 941 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 RENP00797 406 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 LAPTM4AQ15012 233 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 ARSIQ5FYB1 569 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 ATAT1Q5SQI0 421 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 NPWQ8N729 165 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 ZNF676Q8N7Q3 588 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 TMIEQ8NEW7 156 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 OR6K6Q8NGW6 343 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 OR5P2Q8WZ92 322 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 LMLNQ96KR4 655 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 PIP5K1AQ99755 562 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 OR51B5Q9H339 312 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 DNAJC27Q9NZQ0 273 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 IL36AQ9UHA7 158 aa8.09□□□□□ -1.12
VPS36-201ENST00000378060 SH3D21A4FU49 640 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TEX28O15482 410 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 SLC19A2O60779 497 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZNF823P16415 610 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 GM2AP17900 193 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ARSDP51689 593 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 GNG2P59768 71 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 PMS2P3Q13401 168 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 RCAN2Q14206 197 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 METTL2BQ6P1Q9 378 aaKnown RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 PGM2L1Q6PCE3 622 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZNF613Q6PF04 617 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CCBE1Q6UXH8 406 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 LOXHD1Q8IVV2 1947 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 DCUN1D3Q8IWE4 304 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ABHD11Q8NFV4 315 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms