RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ZWINTO95229 277 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 ESRRBO95718 433 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 TGFB1P01137 390 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 CYC1P08574 325 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 RNH1P13489 461 aaKnown RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 MMP11P24347 488 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 PTX3P26022 381 aaPredicted RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 TSFMP43897 325 aaKnown RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 MTTPP55157 894 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 OLR1P78380 273 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 AP5B1Q2VPB7 878 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 DEFB109BQ30KR1 87 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 FAM69BQ5VUD6 431 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 LETMD1Q6P1Q0 360 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 C10orf107Q8IVU9 208 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 ZC3H7AQ8IWR0 971 aaKnown RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 CDYL2Q8N8U2 506 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 PPP1R14CQ8TAE6 165 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 ZBTB9Q96C00 473 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 PEX11GQ96HA9 241 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 F2RL3Q96RI0 385 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 SERPINI1Q99574 410 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 TRMOQ9BU70 441 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 GSTO2Q9H4Y5 243 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 KLHL31Q9H511 634 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 MID1IP1Q9NPA3 183 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 KCNK9Q9NPC2 374 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 ACSS2Q9NR19 701 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 NMRK1Q9NWW6 199 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 C3orf18Q9UK00 162 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 MKL2Q9ULH7 1088 aa13.72□□□□□ -0.21
UBE4B-203ENST00000377153 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
UBE4B-203ENST00000377153 ZZEF1O43149 2961 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ITPR1Q14643 2758 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 A0A0G2JN53 185 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 MAGEB17A8MXT2 336 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 IDSB3KWA1 339 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 FOXE1O00358 373 aaPredicted RBP13.71□□□□□ -0.21
UBE4B-203ENST00000377153 TYROBPO43914 113 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 BMP10O95393 424 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 UMODP07911 640 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ACPPP15309 386 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 CERS1P27544 350 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ARFIP1P53367 373 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 EMP2P54851 167 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.21
UBE4B-203ENST00000377153 CUL3Q13618 768 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ATP1A4Q13733 1029 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 NUDT13Q86X67 352 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 OR5T3Q8NGG3 340 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 WDR20Q8TBZ3 569 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 METTL6Q8TCB7 284 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 ADAMTS17Q8TE56 1095 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
UBE4B-203ENST00000377153 SELENOMQ8WWX9 145 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 RGMAQ96B86 450 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 TBC1D20Q96BZ9 403 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 FER1L6-AS2Q96M78 137 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 RBCK1Q9BYM8 510 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 OR51B5Q9H339 312 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 EML4Q9HC35 981 aaKnown RBP13.71□□□□□ -0.21
UBE4B-203ENST00000377153 C19orf25Q9UFG5 118 aaPredicted RBP13.71□□□□□ -0.21
UBE4B-203ENST00000377153 PPT2Q9UMR5 302 aa13.71□□□□□ -0.21
UBE4B-203ENST00000377153 SAP18O00422 153 aaKnown RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 CHST10O43529 356 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 ULK1O75385 1050 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 CDC123O75794 336 aaPredicted RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 SEMA3DO95025 777 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 B3GALT4O96024 378 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 FHP07954 510 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 C8orf89P0DMQ9 161 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 NEFHP12036 1026 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 H2AFXP16104 143 aaPredicted RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 CREB1P16220 341 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 NEK2P51955 445 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 TUBB8Q3ZCM7 444 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 SGO1Q5FBB7 561 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 DEPDC1Q5TB30 811 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 MED25Q71SY5 747 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 PPP1R32Q7Z5V6 425 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 TMEM102Q8N9M5 508 aaPredicted RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 AGAP11Q8TF27 550 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 EXTL1Q92935 676 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 MTFMTQ96DP5 389 aaKnown RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 CNDP1Q96KN2 507 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 UBL7Q96S82 380 aaPredicted RBP13.7□□□□□ -0.22
UBE4B-203ENST00000377153 ACBD3Q9H3P7 528 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 VIPAS39Q9H9C1 493 aa13.7□□□□□ -0.22
UBE4B-203ENST00000377153 BRF2Q9HAW0 419 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms