RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MOAP1Q96BY2 351 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 SIGLEC10Q96LC7 697 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DPH7Q9BTV6 452 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 STOML2Q9UJZ1 356 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 E7EQ34 232 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CREG1O75629 220 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 SOX14O95416 240 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 HCKP08631 526 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CD9P21926 228 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
GPC6-201ENST00000377047 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 LRRC46Q96FV0 321 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
GPC6-201ENST00000377047 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 MED28Q9H204 178 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CYTH4Q9UIA0 394 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 NPIPA2E9PIF3 369 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 NPIPA3F8WFD2 350 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 H3BNX3 289 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PLD2O14939 933 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 NPC1O15118 1278 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RABIFP47224 123 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 GSK3BP49841 420 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 NCEH1Q6PIU2 408 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 USP43Q70EL4 1123 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 JAGN1Q8N5M9 183 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 LRRC15Q8TF66 581 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 TMED9Q9BVK6 235 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PPP4R1LQ9P1A2 415 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RARRES3Q9UL19 164 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 ZNF878C9JN71 531 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 ADRB3P13945 408 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 OTX2P32243 289 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RORCP51449 518 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 SCN1BQ07699 218 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 ZSCAN4Q8NAM6 433 aaPredicted RBP13.13□□□□□ -0.31
GPC6-201ENST00000377047 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
GPC6-201ENST00000377047 TTYH2Q9BSA4 534 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 IL3P08700 152 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RPS15AP62244 130 aaKnown RBP13.13□□□□□ -0.31
GPC6-201ENST00000377047 HHEXQ03014 270 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 STX12Q86Y82 276 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 HPS1Q92902 700 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 TSSK6Q9BXA6 273 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 HCFC1R1Q9NWW0 138 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 TAS2R1Q9NYW7 299 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 FABP12A6NFH5 140 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PDLIM1O00151 329 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 OR12D1P0DN82 309 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 SLC6A6P31641 620 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 GJA5P36382 358 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RAB28P51157 221 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 CEBPGP53567 150 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 MERTKQ12866 999 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 TPRG1LQ5T0D9 272 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.13□□□□□ -0.31
GPC6-201ENST00000377047 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 RBP7Q96R05 134 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
GPC6-201ENST00000377047 A0A1W2PP18 115 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ITGB1P05556 798 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 JUPP14923 745 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 CEBPBP17676 345 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 XRCC1P18887 633 aaPredicted RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 DEFB103AP81534 67 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 PMS2P3Q13401 168 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 PSAPL1Q6NUJ1 521 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 TIFABQ6ZNK6 161 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZNF761Q86XN6 746 aaPredicted RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 PLXDC1Q8IUK5 500 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 PLD6Q8N2A8 252 aaKnown RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 TMEM234Q8WY98 164 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 LATO43561 262 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 SELENOVP59797 346 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 TTLL10Q6ZVT0 673 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 NUP43Q8NFH3 380 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 VILLO15195 856 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 MRPL10Q7Z7H8 261 aaKnown RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 FIBINQ8TAL6 211 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 MCHR1Q99705 422 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms