RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TRIM40Q6P9F5 258 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 PAOXQ6QHF9 649 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 IGDCC3Q8IVU1 814 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SIAH3Q8IW03 269 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 ZNF595Q8IYB9 648 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 KLHDC8AQ8IYD2 350 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SRFBP1Q8NEF9 429 aaKnown RBP13.8□□□□□ -0.2
HDAC6-204ENST00000376643 MTFMTQ96DP5 389 aaKnown RBP13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SMIM10Q96HG1 83 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 RHBGQ9H310 441 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 RHOJQ9H4E5 214 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-204ENST00000376643 TIMMDC1Q9NPL8 285 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SPACA6W5XKT8 324 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 CRYBG3Q68DQ2 2970 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 TRBV11-1A0A0K0K1C0 115 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 NPEPPSL1A6NEC2 478 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CLGNO14967 610 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CLEC3AO75596 197 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 SEC31AO94979 1220 aaKnown RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 PRF1P14222 555 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 MAOAP21397 527 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 IVDP26440 423 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 ITGA8P53708 1063 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 RAB38P57729 211 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 BTN3A2P78410 334 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 BTG2P78543 158 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 SLC13A2Q13183 592 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 LAPTM5Q13571 262 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 EFTUD2Q15029 972 aaKnown RBP eCLIP13.79□□□□□ -0.25e-7■■■■■ 27.1
HDAC6-204ENST00000376643 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 PAGE2BQ5JRK9 111 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 TMEM211Q6ICI0 200 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 TRMT10BQ6PF06 316 aaKnown RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 KLHL7Q8IXQ5 586 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CA13Q8N1Q1 262 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 TMEM132CQ8N3T6 1108 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 KIF2BQ8N4N8 673 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CREB3L4Q8TEY5 395 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 CCT6BQ92526 530 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 HES7Q9BYE0 225 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 DERL2Q9GZP9 239 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 PRTFDC1Q9NRG1 225 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 MOCS1Q9NZB8 636 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 SLC17A6Q9P2U8 582 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 FBXW2Q9UKT8 454 aa13.79□□□□□ -0.2
HDAC6-204ENST00000376643 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
HDAC6-204ENST00000376643 SCN3AQ9NY46 2000 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ACOT7O00154 380 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 CDC7O00311 574 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ERI3O43414 337 aaKnown RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 MAN1A2O60476 641 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ZFAND5O76080 213 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 MYO1DO94832 1006 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 S100BP04271 92 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 TUBB4AP04350 444 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 CAPN3P20807 821 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SLC6A12P48065 614 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SSR4P51571 173 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ATP6V0D1P61421 351 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ADORA2A-AS1P86434 159 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 CALCOCO2Q13137 446 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SLBPQ14493 270 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SLCO4C1Q6ZQN7 724 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SCUBE1Q8IWY4 988 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 FBXO36Q8NEA4 188 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 NFAM1Q8NET5 270 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 DAZLQ92904 295 aaKnown RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 KIAA1191Q96A73 305 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SERINC2Q96SA4 455 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 EFCAB11Q9BUY7 163 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 REXO4Q9GZR2 422 aaKnown RBP13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 NECTIN3Q9NQS3 549 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 ERVK-11Q9UQG0 969 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
HDAC6-204ENST00000376643 LRIT2A6NDA9 550 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 USP27XA6NNY8 438 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 A8MVJ9 347 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms