RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 GPX6P59796 221 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 RBPJQ06330 500 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 SP5Q6BEB4 398 aaPredicted RBP13.32□□□□□ -0.28
NELFE-201ENST00000375425 SULT1C3Q6IMI6 304 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 GALNTL5Q7Z4T8 443 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 SLC34A3Q8N130 599 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 TMEM178AQ8NBL3 297 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 CCT6BQ92526 530 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 ESAMQ96AP7 390 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 TSPAN17Q96FV3 270 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 GPR22Q99680 433 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 RBBP8Q99708 897 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 TMEM79Q9BSE2 394 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 NT5DC2Q9H857 520 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 CNOT10Q9H9A5 744 aaKnown RBP13.32□□□□□ -0.28
NELFE-201ENST00000375425 WWOXQ9NZC7 414 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 GPRC5BQ9NZH0 403 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 GRHL1Q9NZI5 618 aa13.32□□□□□ -0.28
NELFE-201ENST00000375425 ASPDHA6ND91 283 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 FAM159BA6NKW6 160 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CDK2AP1O14519 115 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CLGNO14967 610 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ERI3O43414 337 aaKnown RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 PRAMEF4O60810 478 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CLEC3AO75596 197 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 STK16O75716 305 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 TBX6O95947 436 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 GSTM2P28161 218 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 TPP2P29144 1249 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 GP5P40197 560 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CA7P43166 264 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 PLA2G16P53816 162 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 MLF1P58340 268 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ATP6V0D1P61421 351 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 C2orf54Q08AI8 447 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 OR4D1Q15615 310 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.288e-9■■■■□ 19.8
NELFE-201ENST00000375425 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CDKL4Q5MAI5 379 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 PRAMEF9Q5VWM5 478 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 MYO7BQ6PIF6 2116 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 GAL3ST3Q96A11 431 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 CCDC120Q96HB5 630 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 SEC16BQ96JE7 1060 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 UBXN10Q96LJ8 280 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 NPLQ9BXD5 320 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 DEFB126Q9BYW3 111 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 REXO4Q9GZR2 422 aaKnown RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 TSPAN10Q9H1Z9 355 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 EHD1Q9H4M9 534 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 SH3BGRL2Q9UJC5 107 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
NELFE-201ENST00000375425 MMACHCQ9Y4U1 282 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 LRBAP50851 2863 aa13.31□□□□□ -0.28
NELFE-201ENST00000375425 PRSS44E7EML9 344 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 SLC19A2O60779 497 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 SLC25A12O75746 678 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 C1QAP02745 245 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 KCNC1P48547 511 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 CYB561P49447 251 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 PLTPP55058 493 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 XKR6Q5GH73 641 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 GRTP1Q5TC63 336 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 VN1R5Q7Z5H4 357 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 CTAGE3PQ8IX95 158 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 SNX31Q8N9S9 440 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 ITLN2Q8WWU7 325 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 KIAA1191Q96A73 305 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 GPR137Q96N19 417 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 FRMD6Q96NE9 622 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 PNO1Q9NRX1 252 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 SUCOQ9UBS9 1254 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 PTBP2Q9UKA9 531 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ENTPD4Q9Y227 616 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 UTP11Q9Y3A2 253 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 A0A088AWK7 358 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 CLDN4O14493 209 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 B3GALT2O43825 422 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 FAM155BO75949 473 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 MYO1DO94832 1006 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 MLYCDO95822 493 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 GSTA2P09210 222 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ZNF10P21506 573 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 CASQ1P31415 396 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 HPDP32754 393 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms