RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MEP1AQ16819 746 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 C6orf141Q5SZD1 244 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 GPR107Q5VW38 600 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 LCTLQ6UWM7 567 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 GPR155Q7Z3F1 870 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 NAGSQ8N159 534 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 C16orf78Q8WTQ4 265 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 NRBF2Q96F24 287 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 LGR4Q9BXB1 951 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 SPNS1Q9H2V7 528 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 EBF1Q9UH73 591 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 EXO1Q9UQ84 846 aaKnown RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 CFAP20Q9Y6A4 193 aaKnown RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF701M0R085 212 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 MID1O15344 667 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 LAMTOR5O43504 91 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 FURINP09958 794 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 SP9P0CG40 484 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 DRD1P21728 446 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 KIR2DL1P43626 348 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 TEAD4Q15561 434 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF385BQ569K4 471 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 METTL4Q8N3J2 472 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 TBC1D20Q96BZ9 403 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 RUBCNLQ9H714 662 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 REEP1Q9H902 201 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 MIEF1Q9NQG6 463 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 TM7SF3Q9NS93 570 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 AHSPQ9NZD4 102 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 PDP1Q9P0J1 537 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 KIF17Q9P2E2 1029 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 TMEFF2Q9UIK5 374 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 CDC14AQ9UNH5 594 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 SAMHD1Q9Y3Z3 626 aaKnown RBP11.57□□□□□ -0.56
HMGCL-202ENST00000374487 STON1Q9Y6Q2 735 aa11.57□□□□□ -0.56
HMGCL-202ENST00000374487 FRYLO94915 3013 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 ANKDD1BA6NHY2 528 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 BCKDKO14874 412 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 ADAM23O75077 832 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 UGT2B11O75310 529 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 C6orf47O95873 294 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 DRD3P35462 400 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CHI3L1P36222 383 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 POLR2IP36954 125 aaKnown RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 PRIM2P49643 509 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CASP9P55211 416 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CD47Q08722 323 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 LRRC32Q14392 662 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CST6Q15828 149 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 WSCD2Q2TBF2 565 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 ZC3H12BQ5HYM0 836 aaKnown RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 TMEM92Q6UXU6 159 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CEP68Q76N32 757 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 IL17RCQ8NAC3 791 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CHDHQ8NE62 594 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 PIK3C3Q8NEB9 887 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 CIDECQ96AQ7 238 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 C12orf43Q96C57 262 aaKnown RBP11.56□□□□□ -0.56
HMGCL-202ENST00000374487 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 TUBA1CQ9BQE3 449 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 SLC35A5Q9BS91 424 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 RIBC2Q9H4K1 309 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 FANCEQ9HB96 536 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 MYNNQ9NPC7 610 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 TAC3Q9UHF0 121 aa11.56□□□□□ -0.56
HMGCL-202ENST00000374487 K7ESF4 209 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SLC16A6O15403 523 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 NOL3O60936 208 aaKnown RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 MITFO75030 526 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 KLF8O95600 359 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 APODP05090 189 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SLC35G4P0C7Q5 338 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ETFAP13804 333 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 FPR1P21462 350 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 PCGF2P35227 344 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 HSD17B2P37059 387 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CXCL12P48061 93 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 IL5RAQ01344 420 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 NHLH1Q02575 133 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 TOP3AQ13472 1001 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 IL18R1Q13478 541 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SIM2Q14190 667 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ARHGAP19Q14CB8 494 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF691Q5VV52 312 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 METRNLQ641Q3 311 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 FAM71E1Q6IPT2 247 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CYP4Z1Q86W10 505 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SPEM1Q8N4L4 309 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 HDDC3Q8N4P3 179 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 OR5K2Q8NHB8 316 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 GOT1L1Q8NHS2 421 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF420Q8TAQ5 688 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ATOH1Q92858 354 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 MTERF3Q96E29 417 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CHST8Q9H2A9 424 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms