RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 RHOXF2Q9BQY4 288 aa21.32■■□□□ 1
COL9A2-201ENST00000372736 REXO4Q9GZR2 422 aaKnown RBP21.32■■□□□ 1
COL9A2-201ENST00000372736 ZNF358Q9NW07 568 aa21.32■■□□□ 1
COL9A2-201ENST00000372736 IKBKGQ9Y6K9 419 aa21.32■■□□□ 1
COL9A2-201ENST00000372736 USP9XQ93008 2570 aaPredicted RBP21.32■■□□□ 1
COL9A2-201ENST00000372736 GFAPP14136 432 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 CNTFP26441 200 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 MSH2P43246 934 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 ALDH18A1P54886 795 aaKnown RBP21.31■■□□□ 1
COL9A2-201ENST00000372736 PFKFB4Q16877 469 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 BTBD16Q32M84 506 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 PAPD4Q6PIY7 484 aaKnown RBP21.31■■□□□ 1
COL9A2-201ENST00000372736 DNAJB14Q8TBM8 379 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 FAR2Q96K12 515 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 CNDP1Q96KN2 507 aa21.31■■□□□ 1
COL9A2-201ENST00000372736 IGKV3D-11A0A0A0MRZ8 115 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 CLEC18AA5D8T8 446 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 LRRC14BA6NHZ5 514 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 FAM227AF5H4B4 570 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 VPS4BO75351 444 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 KRT38O76015 456 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 EPB42P16452 691 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 HPDP32754 393 aaPredicted RBP21.3■■□□□ 1
COL9A2-201ENST00000372736 PLA2G16P53816 162 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 BTG2P78543 158 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 RUNX2Q13950 521 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 ZNF169Q14929 603 aaPredicted RBP21.3■■□□□ 1
COL9A2-201ENST00000372736 CLEC18BQ6UXF7 455 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 LAS2Q8IYD9 372 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 CISD2Q8N5K1 135 aaKnown RBP21.3■■□□□ 1
COL9A2-201ENST00000372736 TEX9Q8N6V9 391 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 CLEC18CQ8NCF0 446 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 ZNF473Q8WTR7 871 aaKnown RBP21.3■■□□□ 1
COL9A2-201ENST00000372736 TXLNGYQ9BZA5 131 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 ASF1BQ9NVP2 202 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 CPSF2Q9P2I0 782 aaKnown RBP21.3■■□□□ 1
COL9A2-201ENST00000372736 VPS4AQ9UN37 437 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 NTNG1Q9Y2I2 539 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 COL12A1Q99715 3063 aa21.3■■□□□ 1
COL9A2-201ENST00000372736 EXOC1LA0A1B0GW35 172 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 TRIM49D1C9J1S8 452 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PSMD12O00232 456 aaPredicted RBP21.29■■□□□ 1
COL9A2-201ENST00000372736 RIPK2O43353 540 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PRMT3O60678 531 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 FAM153BP0C7A2 387 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 MAOAP21397 527 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 GNLYP22749 145 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 GCAP28676 217 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 TSFMP43897 325 aaKnown RBP21.29■■□□□ 1
COL9A2-201ENST00000372736 OR4D2P58180 307 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PCBP2Q15366 365 aaKnown RBP eCLIP21.29■■□□□ 1
COL9A2-201ENST00000372736 TLR1Q15399 786 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 EXT1Q16394 746 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 HIST2H2ACQ16777 129 aaPredicted RBP21.29■■□□□ 1
COL9A2-201ENST00000372736 FAM153CQ494X1 144 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 HIST2H2AA3Q6FI13 130 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 GRHL2Q6ISB3 625 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 MED27Q6P2C8 311 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 TRIM40Q6P9F5 258 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 ABHD17CQ6PCB6 329 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 TRMT10CQ7L0Y3 403 aaKnown RBP21.29■■□□□ 1
COL9A2-201ENST00000372736 CATSPER1Q8NEC5 780 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 UBE2E3Q969T4 207 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PTCHD1Q96NR3 888 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 LPAR4Q99677 370 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 NPLQ9BXD5 320 aaPredicted RBP21.29■■□□□ 1
COL9A2-201ENST00000372736 MS4A8Q9BY19 250 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PRDM9Q9NQV7 894 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 PLA2G3Q9NZ20 509 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 MAP10Q9P2G4 905 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 HECTD1Q9ULT8 2610 aa21.29■■□□□ 1
COL9A2-201ENST00000372736 A0A088AWK7 358 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 TCRBV16S1A1N1A0A5B0 115 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 B3GALT2O43825 422 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 UQCRHP07919 91 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 ZNF10P21506 573 aaPredicted RBP21.28■■□□□ 1
COL9A2-201ENST00000372736 CERS1P27544 350 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 ARG2P78540 354 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 SRSF1Q07955 248 aaKnown RBP eCLIP21.28■■□□□ 13e-7■□□□□ 9.1
COL9A2-201ENST00000372736 UBE3DQ7Z6J8 389 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 M1APQ8TC57 530 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 F2RL3Q96RI0 385 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 BARD1Q99728 777 aaKnown RBP21.28■■□□□ 1
COL9A2-201ENST00000372736 RNF32Q9H0A6 362 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 MMP25Q9NPA2 562 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 NECTIN3Q9NQS3 549 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 XPR1Q9UBH6 696 aa21.28■■□□□ 1
COL9A2-201ENST00000372736 DYTNA2CJ06 578 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 TCP11X1B4DZS4 312 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 SIX3O95343 332 aaPredicted RBP21.27■■□□□ 1
COL9A2-201ENST00000372736 PCNAP12004 261 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 MTTPP55157 894 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 RAB38P57729 211 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 SLC26A5P58743 744 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 ACTN3Q08043 901 aaPredicted RBP21.27■■□□□ 1
COL9A2-201ENST00000372736 ESPL1Q14674 2120 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 TSNAXIP1Q2TAA8 658 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 H3F3CQ6NXT2 135 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 SCUBE1Q8IWY4 988 aa21.27■■□□□ 1
COL9A2-201ENST00000372736 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms