RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SHDQ96IW2 340 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 CMKLR1Q99788 373 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 C1orf21Q9H246 121 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 COCHO43405 550 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 SFT2D3Q587I9 215 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 NCEH1Q6PIU2 408 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 PDSS2Q86YH6 399 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF700Q9H0M5 742 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 TREM1Q9NP99 234 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 MS4A12Q9NXJ0 267 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 PCDHGB2Q9Y5G2 931 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 ROBO1Q9Y6N7 1651 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 FHP07954 510 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 CD72P21854 359 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 GPAT4Q86UL3 456 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 CCDC116Q8IYX3 515 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 OR5T2Q8NGG2 359 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 OR8S1Q8NH09 359 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 PEPDP12955 493 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 NUP50Q9UKX7 468 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 TEX13DA0A0J9YY54 714 aaPredicted RBP21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 NFKBIEO00221 500 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 PROM1O43490 865 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 CLIC3O95833 236 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 VSX2P58304 361 aaPredicted RBP21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 CLRN1P58418 232 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC33A1O00400 549 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 NUAK1O60285 661 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 REEP3Q6NUK4 255 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 OSTF1Q92882 214 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 MCHR1Q99705 422 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 BEX2Q9BXY8 128 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 REEP4Q9H6H4 257 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 BEX1Q9HBH7 125 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 NUDT15Q9NV35 164 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 HTR3EA5X5Y0 456 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 CAPN5O15484 640 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 DNAJB1P25685 340 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 HNF1BP35680 557 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 RPL19P84098 196 aaKnown RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 RAB12Q6IQ22 244 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 MMABQ96EY8 250 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 LRRC42Q9Y546 428 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 SNED1Q8TER0 1413 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 C11orf98E9PRG8 122 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 BCAS2O75934 225 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 GJB5O95377 273 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 SOD2P04179 222 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 EDNRBP24530 442 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 SSX6Q7RTT6 188 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF611Q8N823 705 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 AVL9Q8NBF6 648 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF317Q96PQ6 595 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 LIN28AQ9H9Z2 209 aaKnown RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC45A1Q9Y2W3 748 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 GNG2P59768 71 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 INCA1Q0VD86 236 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 FLYWCH1Q4VC44 716 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 AURKBQ96GD4 344 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 TMEM41AQ96HV5 264 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 HCN4Q9Y3Q4 1203 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 DSG2Q14126 1118 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 LRRC69Q6ZNQ3 347 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 SIGLEC10Q96LC7 697 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 TSGA13Q96PP4 275 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 HRASLS2Q9NWW9 162 aa21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 C19orf25Q9UFG5 118 aaPredicted RBP21.37■■□□□ 1.01
TM9SF3-201ENST00000371142 PVALBP20472 110 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ARRB1P49407 418 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 JAG1P78504 1218 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 HMGN2P46Q86SG4 172 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 NPLQ9BXD5 320 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 IL21RQ9HBE5 538 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 STOX2Q9P2F5 926 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 TMEM59LQ9UK28 342 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FBXL3Q9UKT7 428 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 IFNA7P01567 189 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 OR12D1P0DN82 309 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ELK4P28324 431 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 MAGEA2P43356 314 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 TRAM2Q15035 370 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 SEC23BQ15437 767 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 KRTCAP2Q8N6L1 136 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 OR6N2Q8NGY6 317 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FAM72CH0Y354 149 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 BPNT1O95861 308 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 UQCRC2P22695 453 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 STK19P49842 368 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 POU6F2P78424 691 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF792Q3KQV3 632 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 PLEKHS1Q5SXH7 462 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FAM72AQ5TYM5 149 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FAM72DQ6L9T8 149 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FIP1L1Q6UN15 594 aaKnown RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FAM72BQ86X60 149 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 POLDIP3Q9BY77 421 aaKnown RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF350Q9GZX5 532 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 HSPA12AO43301 675 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 PDYNP01213 254 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms