RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SMPDL3AQ92484 453 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 NR4A3Q92570 626 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 BEST1O76090 585 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 EPCAMP16422 314 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 GCAP28676 217 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 WNT7BP56706 349 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TRAM2Q15035 370 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 ISCA2Q86U28 154 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 OR8J1Q8NGP2 316 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TFAP2CQ92754 450 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 PSMD9O00233 223 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 PLD2O14939 933 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 VIPR1P32241 457 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 EIF5AL1Q6IS14 154 aaKnown RBP16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 CPA6Q8N4T0 437 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 THAP6Q8TBB0 222 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 OARD1Q9Y530 152 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 CD40LGP29965 261 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 ARSDP51689 593 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 KCNC3Q14003 757 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TPGS2Q68CL5 300 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 RAB12Q6IQ22 244 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 PNCKQ6P2M8 343 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 RBM23Q86U06 439 aaKnown RBP16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 IGFN1Q86VF2 1251 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TP53INP2Q8IXH6 220 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 OR56A1Q8NGH5 318 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 GAL3ST4Q96RP7 486 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 TREM1Q9NP99 234 aa16.54■□□□□ 0.24
PTP4A1-201ENST00000370651 SCAMP1O15126 338 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 FLRT2O43155 660 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 GATBO75879 557 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 ZNF30P17039 623 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CLCN7P51798 805 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CARM1Q86X55 608 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 KCT2Q8NC54 265 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 S100A16Q96FQ6 103 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 MSANTD3Q96H12 275 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 PSKH2Q96QS6 385 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 TM9SF2Q99805 663 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 RANBP3Q9H6Z4 567 aaPredicted RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 KRBA1A5PL33 1030 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CHP2O43745 196 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SNAPC5O75971 98 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CRISP1P54107 249 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 FADDQ13158 208 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 NFATC2Q13469 925 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 LASP1Q14847 261 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 C22orf42Q6IC83 251 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 ZNF366Q8N895 744 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 DCAF4L2Q8NA75 395 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 PROKR2Q8NFJ6 384 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 CD93Q9NPY3 652 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 FAAHO00519 579 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 APOL3O95236 402 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 C8AP07357 584 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SCGB2B2Q4G0G5 96 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 Q6ZVU0 165 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 TMCO2Q7Z6W1 182 aaPredicted RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 OR51G2Q8NGK0 314 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 ADAD1Q96M93 576 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 EXO5Q9H790 373 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 TMEM181Q9P2C4 612 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 PCDHB11Q9Y5F2 797 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 POP7O75817 140 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 PDHA2P29803 388 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SLC36A3Q495N2 470 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 TOR1AIP1Q5JTV8 583 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 LIPJQ5W064 366 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SLC27A4Q6P1M0 643 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 NPWQ8N729 165 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 SH3RF2Q8TEC5 729 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 UBQLN2Q9UHD9 624 aa16.53■□□□□ 0.24
PTP4A1-201ENST00000370651 MITFO75030 526 aaPredicted RBP16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 TMED4Q7Z7H5 227 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 TIGD4Q8IY51 512 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 GALNT6Q8NCL4 622 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 NLGN3Q9NZ94 848 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 PLCL2Q9UPR0 1127 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 HEBP2Q9Y5Z4 205 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 SETD1AO15047 1707 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 C12orf71A8MTZ7 269 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 AOC2O75106 756 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 DCKP27707 260 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 SEC23BQ15437 767 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 PSD4Q8NDX1 1056 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 GNPDA2Q8TDQ7 276 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 FEVQ99581 238 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 SACM1LQ9NTJ5 587 aa16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 ZFR2Q9UPR6 939 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-201ENST00000370651 ACP5P13686 325 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms