RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 PCTPQ9UKL6 214 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 NRXN3Q9Y4C0 1643 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3DA0A087WVF3 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3IA0A087WXS9 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3EA0A087X179 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3KA0A087X1G2 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3FA6NER0 549 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3LB9A6J9 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3HP0C7X1 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 DCTP40126 519 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 MAN2A2P49641 1150 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 HNRNPFP52597 415 aaKnown RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 MC1RQ01726 317 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TOMM20Q15388 145 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3GQ6DHY5 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3CQ6IPX1 549 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GDPD4Q6W3E5 623 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TBC1D3Q8IZP1 549 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 NELL2Q99435 816 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TREM1Q9NP99 234 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 DEC1Q9P2X7 70 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 PCDHB11Q9Y5F2 797 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 AMZ2Q86W34 360 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 NETO1Q8TDF5 533 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 RAB8BQ92930 207 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 C7orf72A4D263 438 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 FAAHO00519 579 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 FGF19O95750 216 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 MT-ND5P03915 603 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 OR12D2P58182 307 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 CAMK1Q14012 370 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 UMODL1-AS1Q8N2C9 162 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 OR2AP1Q8NGE2 309 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 GNPDA2Q8TDQ7 276 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 LCN9Q8WX39 176 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 OSTF1Q92882 214 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 C12orf66Q96MD2 445 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 FEVQ99581 238 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 SNRPD2P62316 118 aaKnown RBP15.36■□□□□ 0.05
COL17A1-202ENST00000369733 UBE2UQ5VVX9 321 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 TTLQ8NG68 377 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF514Q96K75 400 aaPredicted RBP15.36■□□□□ 0.05
COL17A1-202ENST00000369733 MCCC1Q96RQ3 725 aaPredicted RBP15.36■□□□□ 0.05
COL17A1-202ENST00000369733 SPATA9Q9BWV2 254 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 DLGAP4Q9Y2H0 992 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 B3GALT2O43825 422 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 RP2O75695 350 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 PRH1P02810 166 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 TFPIP10646 304 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 S100GP29377 79 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 HSD17B2P37059 387 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 TAS2R43P59537 309 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 TMEM130Q8N3G9 435 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 SLA2Q9H6Q3 261 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 TAS2R10Q9NYW0 307 aa15.36■□□□□ 0.05
COL17A1-202ENST00000369733 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PSMD9O00233 223 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 TLL1O43897 1013 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 SNAPC5O75971 98 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 OR7A10O76100 309 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ACADLP28330 430 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 EIF5AP63241 154 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 GRM2Q14416 872 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 TPRG1Q6ZUI0 275 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 NPAS4Q8IUM7 802 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 DPCDQ9BVM2 203 aaPredicted RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PPIL3Q9H2H8 161 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CD93Q9NPY3 652 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 LYARQ9NX58 379 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ZFR2Q9UPR6 939 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 RPP14O95059 124 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 DNASE1P24855 282 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 DCKP27707 260 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 INHBEP58166 350 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PSAPL1Q6NUJ1 521 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 GALNT10Q86SR1 603 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PLCZ1Q86YW0 608 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF366Q8N895 744 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 DEDD2Q8WXF8 326 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 NAA50Q9GZZ1 169 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ANKMY1Q9P2S6 941 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CDH10Q9Y6N8 788 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ELOA3DA6NLF2 546 aaPredicted RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PROM1O43490 865 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 RASGRP1O95267 797 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 FGF4P08620 206 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 HAPLN1P10915 354 aaPredicted RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CBX5P45973 191 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 FOXA1P55317 472 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CLDN8P56748 225 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ELOA3BQ3SY89 546 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 FAM124AQ86V42 546 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 TMEM151AQ8N4L1 468 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CHCHD4Q8N4Q1 142 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 ELOA3Q8NG57 546 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms