RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SPNS1Q9H2V7 528 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 CD320Q9NPF0 282 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 B3GNT3Q9Y2A9 372 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 KLHL20Q9Y2M5 609 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 MEN1O00255 615 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 SNPHO15079 494 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CRYZL1O95825 349 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 BMP4P12644 408 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 IL7RP16871 459 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 TACR1P25103 407 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 MAOBP27338 520 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 TGFBR1P36897 503 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 TRPC1P48995 793 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DPTQ07507 201 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DOC2AQ14183 400 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 RSBN1Q5VWQ0 802 aaPredicted RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 NLRP8Q86W28 1048 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 NACC2Q96BF6 587 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DMRTB1Q96MA1 342 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 C12orf66Q96MD2 445 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 GABRG3Q99928 467 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PHF7Q9BWX1 381 aaPredicted RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 CCDC90BQ9GZT6 254 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 ACTL8Q9H568 366 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 C6orf106Q9H6K1 298 aaPredicted RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 DLGAP4Q9Y2H0 992 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CABIN1Q9Y6J0 2220 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CACNA1IQ9P0X4 2223 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DENND4AQ7Z401 1863 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 MGAT4DA6NG13 374 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 NPC1O15118 1278 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 KPNA5O15131 536 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 TMCC2O75069 709 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PSIP1O75475 530 aaKnown RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 ABCB1P08183 1280 aaPredicted RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 MPC1LP0DKB6 136 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 RAP2AP10114 183 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 THRBP10828 461 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PRKACGP22612 351 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 HNF4AP41235 474 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 ARSFP54793 590 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CYP4F3Q08477 520 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 HORMAD1Q86X24 394 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 GLMNQ92990 594 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 SH3KBP1Q96B97 665 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 APIPQ96GX9 242 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 FUNDC2Q9BWH2 189 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 ZDHHC5Q9C0B5 715 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 LRTM1Q9HBL6 345 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 HMG20AQ9NP66 347 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PCDHB3Q9Y5E6 796 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 NCOR1O75376 2440 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PTGES3LE9PB15 166 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 G3V2T6 193 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PLRG1O43660 514 aaKnown RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 HS6ST1O60243 411 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PRKD3O94806 890 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 EML2O95834 649 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 NAT2P11245 290 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 UBL4AP11441 157 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DRD1P21728 446 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 IFNA8P32881 189 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 VAC14Q08AM6 782 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 CCINQ13939 588 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 GAS6Q14393 721 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 KRT33BQ14525 404 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 ADCK2Q7Z695 626 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 KIAA1958Q8N8K9 716 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 OR2L2Q8NH16 312 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 HLA-CQ95604 372 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 FERD3LQ96RJ6 166 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 MACROD1Q9BQ69 325 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 UGT2B28Q9BY64 529 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 SLC7A5P2Q9GIP4 190 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 RDH14Q9HBH5 336 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 PLSCR3Q9NRY6 295 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 DDX28Q9NUL7 540 aaKnown RBP10.22□□□□□ -0.77
TPM3-212ENST00000368533 NCKAP1Q9Y2A7 1128 aa10.22□□□□□ -0.77
TPM3-212ENST00000368533 IDH3BO43837 385 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 ETHE1O95571 254 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 SLC6A12P48065 614 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.77
TPM3-212ENST00000368533 DAG1Q14118 895 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 SPATS1Q496A3 300 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 CCNYL2Q5T2Q4 361 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 IRAK1BP1Q5VVH5 260 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 XAF1Q6GPH4 301 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 NDNFQ8TB73 568 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 FAM120BQ96EK7 910 aaKnown RBP10.21□□□□□ -0.77
TPM3-212ENST00000368533 SLC47A1Q96FL8 570 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 COX14Q96I36 57 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 APOOQ9BUR5 198 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 GPR174Q9BXC1 333 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 LMAN1LQ9HAT1 526 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 SGK2Q9HBY8 427 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 PHPT1Q9NRX4 125 aaPredicted RBP10.21□□□□□ -0.77
TPM3-212ENST00000368533 EXD2Q9NVH0 621 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms