RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ECHS1P30084 290 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 RORCP51449 518 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ARSDP51689 593 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 MEP1AQ16819 746 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ZFP69Q49AA0 526 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 NLGN4YQ8NFZ3 816 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 DPH7Q9BTV6 452 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 TAS2R7Q9NYW3 318 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 LOC100130705A0A1B0GUX0 176 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ITGA5P08648 1049 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SCN1BQ07699 218 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ST3GAL3Q11203 375 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 QSOX2Q6ZRP7 698 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 C1orf216Q8TAB5 229 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 RIT1Q92963 219 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 CD180Q99467 661 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 DPH2Q9BQC3 489 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 VNN3Q9NY84 501 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SLC22A2O15244 555 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SMSP52788 366 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 CLRN1P58418 232 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ABRAXAS2Q15018 415 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 USP43Q70EL4 1123 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 CNDP2Q96KP4 475 aaKnown RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 TSGA13Q96PP4 275 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF221Q9UK13 617 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ACSL5Q9ULC5 683 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 POFUT2Q9Y2G5 429 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 A0A1W2PRG6 482 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 TBX10O75333 385 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 GSRP00390 522 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 EDNRBP24530 442 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 NRROSQ86YC3 692 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 KIAA1143Q96AT1 154 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 PSKH2Q96QS6 385 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 OR51I1Q9H343 314 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 REEP4Q9H6H4 257 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 ACSL6Q9UKU0 697 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 A0A1W2PP18 115 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 C5orf51A6NDU8 294 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 WASHC1A8K0Z3 465 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 WASH3PC4AMC7 463 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 TIMP1P01033 207 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 GRPRP30550 384 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 MAN2A2P49641 1150 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 POU6F2P78424 691 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 ZXDBP98169 803 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 HERC3Q15034 1050 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 WASH2PQ6VEQ5 465 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 TRIM73Q86UV7 250 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SNX29P2Q8IUI4 249 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 ORAI3Q9BRQ5 295 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 STRADBQ9C0K7 418 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 MBD2Q9UBB5 411 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF451Q9Y4E5 1061 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 A6NCN8 305 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 AHSA1O95433 338 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 HNRNPA1P09651 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 FGF3P11487 239 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 EMX2Q04743 252 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SLC18A2Q05940 514 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 FAM69BQ5VUD6 431 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SLC22A8Q8TCC7 542 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SGCDQ92629 289 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 C10orf71Q711Q0 1435 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 AQP12BA6NM10 295 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 J3QRK9 145 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 TACSTD2P09758 323 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 CEBPBP17676 345 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 MTTPP55157 894 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 AQP12AQ8IXF9 295 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 RPLP0P6Q8NHW5 317 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 CCDC120Q96HB5 630 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 HHIPQ96QV1 700 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 MCHR1Q99705 422 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 B3GAT2Q9NPZ5 323 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 FAM120CQ9NX05 1096 aaKnown RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 PRSS51A0A1B0GVH4 220 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 H6PDO95479 791 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 HMGN1P05114 100 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 SRPRAP08240 638 aaKnown RBP12.42□□□□□ -0.42
PTPRK-207ENST00000368226 GALNT12Q8IXK2 581 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 OARD1Q9Y530 152 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
PTPRK-207ENST00000368226 OAZ2O95190 189 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 C1GALT1C1LP0DN25 315 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 HK1P19367 917 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 AP3S2P59780 193 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ROR2Q01974 943 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 MORN1Q5T089 497 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 LDLRAD1Q5T700 205 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 SLC15A3Q8IY34 581 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms