RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 IFITM3Q01628 133 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 CDC20Q12834 499 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 EXOC3L2Q2M3D2 409 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 TMEM215Q68D42 235 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 ANGPTL8Q6UXH0 198 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 ZNF765Q7L2R6 523 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 ARMCX6Q7L4S7 300 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
CD48-201ENST00000368045 LILRA3Q8N6C8 439 aaPredicted RBP13.7□□□□□ -0.22
CD48-201ENST00000368045 OR9A1PQ8NGU1 263 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 NFKBIDQ8NI38 313 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 SETD7Q8WTS6 366 aaKnown RBP13.7□□□□□ -0.22
CD48-201ENST00000368045 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
CD48-201ENST00000368045 SP140LQ9H930 580 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 TAS2R9Q9NYW1 312 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 UGT2A1Q9Y4X1 527 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 CENPFP49454 3210 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 PIPSLA2A3N6 862 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 EFCAB10A6NFE3 127 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 TMEM221A6NGB7 291 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 FKTNO75072 461 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 ATP6V1G1O75348 118 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 RPLP0P05388 317 aaKnown RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 TPP2P29144 1249 aaPredicted RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 PDHA2P29803 388 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 CHI3L1P36222 383 aaPredicted RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 MAGEA8P43361 318 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 C2orf80Q0P641 193 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 IRF3Q14653 427 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 ZNF181Q2M3W8 571 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 TRIM60Q495X7 471 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 LY6G5CQ5SRR4 150 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 NXPE4Q6UWF7 544 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 ZNF367Q7RTV3 350 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 CCDC103Q8IW40 242 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 PROX1Q92786 737 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 FOXJ1Q92949 421 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 DTD2Q96FN9 168 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 COQ10AQ96MF6 247 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 TMEM184CQ9NVA4 438 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 IMPAD1Q9NX62 359 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 HCN4Q9Y3Q4 1203 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
CD48-201ENST00000368045 ENPP4Q9Y6X5 453 aa13.69□□□□□ -0.22
CD48-201ENST00000368045 CCL16O15467 120 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ADAM23O75077 832 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 SH3BGRLO75368 114 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CCNB2O95067 398 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CXCL14O95715 111 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 SYN1P17600 705 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 RHCEP18577 417 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 GADD45AP24522 165 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 SLC19A1P41440 591 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CDC42P60953 191 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ZNF77Q15935 545 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 SYT16Q17RD7 645 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CATSPEREQ5SY80 951 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ZNF852Q6ZMS4 543 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 FAM92BQ6ZTR7 304 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 RTL10Q7L3V2 364 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 NATD1Q8N6N6 113 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ZNF675Q8TD23 568 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 SLC5A11Q8WWX8 675 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ZNF514Q96K75 400 aaPredicted RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CPNE5Q9HCH3 593 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.22
CD48-201ENST00000368045 DUSP12Q9UNI6 340 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 ICKQ9UPZ9 632 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 WBP11Q9Y2W2 641 aaKnown RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 ZNF451Q9Y4E5 1061 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 PCDHGA3Q9Y5H0 932 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 KLK4Q9Y5K2 254 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 C17orf113A0A1B0GUU1 675 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 A0A1W2PRB8 838 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 UPK1BO75841 260 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 OPN1SWP03999 348 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 DDX5P17844 614 aaKnown RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 CBLP22681 906 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 UQCRC2P22695 453 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 C21orf33P30042 268 aaPredicted RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 IRS1P35568 1242 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 IDH2P48735 452 aaKnown RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 WDR5P61964 334 aaKnown RBP13.68□□□□□ -0.22
CD48-201ENST00000368045 DEFB115Q30KQ5 88 aa13.68□□□□□ -0.22
CD48-201ENST00000368045 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms