RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PGRP06401 933 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 UGT2B7P16662 529 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 GRIA3P42263 894 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 PSME3P61289 254 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 RCN1Q15293 331 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 SLC5A12Q1EHB4 618 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 TRMT5Q32P41 509 aaKnown RBP11.52□□□□□ -0.57
USF1-203ENST00000368021 FAM174BQ3ZCQ3 159 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 KHDRBS2Q5VWX1 349 aaKnown RBP11.52□□□□□ -0.57
USF1-203ENST00000368021 PRMT9Q6P2P2 845 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 NANOGNBQ7Z5D8 188 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 PAQR7Q86WK9 346 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 ANKRD13BQ86YJ7 626 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 SFTPA2Q8IWL1 248 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 SLC15A3Q8IY34 581 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 KRTCAP2Q8N6L1 136 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 TRPV3Q8NET8 790 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 CREB3L4Q8TEY5 395 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 SLC13A3Q8WWT9 602 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 CLPTM1LQ96KA5 538 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
USF1-203ENST00000368021 ACTR10Q9NZ32 417 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 CSNK1G3Q9Y6M4 447 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 AP1M2Q9Y6Q5 423 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 MDC1Q14676 2089 aaKnown RBP11.52□□□□□ -0.57
USF1-203ENST00000368021 DCDC2BA2VCK2 349 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 OR2A25A4D2G3 310 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 LILRA5A6NI73 299 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 FXYD1O00168 92 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 HAT1O14929 419 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 PCDH7O60245 1069 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 NOBOXO60393 691 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 CIB2O75838 187 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 PDE5AO76074 875 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ANXA6P08133 673 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ANXA4P09525 319 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 BCL6P41182 706 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 RXRGP48443 463 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ARFIP1P53367 373 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 ZNF763Q0D2J5 394 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
USF1-203ENST00000368021 PIGGQ5H8A4 983 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 SPESP1Q6UW49 350 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 NET1Q7Z628 596 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 PATL1Q86TB9 770 aaKnown RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 OOSP2Q86WS3 158 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 FAM20CQ8IXL6 584 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ARL14Q8N4G2 192 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 GPR156Q8NFN8 814 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■■■ 33
USF1-203ENST00000368021 NETO1Q8TDF5 533 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 LRRC58Q96CX6 371 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 EGLN2Q96KS0 407 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 CDRT15Q96T59 188 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 EBPLQ9BY08 206 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 DENND2DQ9H6A0 471 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 GNG14A0A1W2PPG7 69 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 SH3BGRLO75368 114 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 SRSF11Q05519 484 aaKnown RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 ADPRMQ3LIE5 342 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 SPATS1Q496A3 300 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 TMEM35AQ53FP2 167 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 PAGE3Q5JUK9 113 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 KLHL35Q6PF15 583 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 CAMKMTQ7Z624 323 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 MFSD9Q8NBP5 474 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 OR8J2Q8NGG1 315 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 OR10G6Q8NH81 332 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 DNAJB8Q8NHS0 232 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 QRFPRQ96P65 431 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 Q9H521 79 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 TMEM181Q9P2C4 612 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 ABCD2Q9UBJ2 740 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 NKX1-2Q9UD57 310 aaPredicted RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 WBP11Q9Y2W2 641 aaKnown RBP11.51□□□□□ -0.57
USF1-203ENST00000368021 PCDH15Q96QU1 1955 aa11.51□□□□□ -0.57
USF1-203ENST00000368021 CROCCQ5TZA2 2017 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 C15orf38-AP3S2A0A0A6YYH1 394 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 LRIT2A6NDA9 550 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 A8MUI8 341 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 PLPP1O14494 284 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 PPM1DO15297 605 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 ZW10O43264 779 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 SDC3O75056 442 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 CER1O95813 267 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 ZNF12P17014 697 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 GSTM5P46439 218 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms