RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 ABCB7O75027 752 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 CCDC159P0C7I6 412 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 UQCRC2P22695 453 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 CRHBPP24387 322 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 CHI3L1P36222 383 aaPredicted RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 CRATP43155 626 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 PRIM2P49643 509 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 IST1P53990 364 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 SELENOWP63302 87 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 HBA1P69905 142 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 SFSWAPQ12872 951 aaKnown RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 GAB1Q13480 694 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 SF1Q15637 639 aaKnown RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 KDM4DQ6B0I6 523 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
USF1-202ENST00000368020 UBALD2Q8IYN6 164 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 TBC1D19Q8N5T2 526 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 MS4A8Q9BY19 250 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 ADNPQ9H2P0 1102 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 MVB12BQ9H7P6 319 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 KIF17Q9P2E2 1029 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 UTS2RQ9UKP6 389 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 EXO1Q9UQ84 846 aaKnown RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 SAMHD1Q9Y3Z3 626 aaKnown RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 PCDHGB3Q9Y5G1 929 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 MAGED1Q9Y5V3 778 aaPredicted RBP13.4□□□□□ -0.26
USF1-202ENST00000368020 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 A0A1W2PRB8 838 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 MYO1GB0I1T2 1018 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 PLRG1O43660 514 aaKnown RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 SH3BGRLO75368 114 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 TNFRSF21O75509 655 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 C6orf47O95873 294 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 C9P02748 559 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 DDCP20711 480 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 DCKP27707 260 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 CLCNKAP51800 687 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ARFIP1P53367 373 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 MAPK12P53778 367 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 CXCR4P61073 352 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 MLF2Q15773 248 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 ZNF385BQ569K4 471 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 C6orf141Q5SZD1 244 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
USF1-202ENST00000368020 ANGPTL8Q6UXH0 198 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 NUDT13Q86X67 352 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 WDR48Q8TAF3 677 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ASB12Q8WXK4 309 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 FAM3CQ92520 227 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 LGR4Q9BXB1 951 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 NLNQ9BYT8 704 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 AMBRA1Q9C0C7 1298 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SOX17Q9H6I2 414 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 CXorf21Q9HAI6 301 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 PREBQ9HCU5 417 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 TMEFF2Q9UIK5 374 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 ABCG2Q9UNQ0 655 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ERVK-11Q9UQG0 969 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 HEBP2Q9Y5Z4 205 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 A0A1W2PP55 124 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 DNTTP04053 509 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 NTRK1P04629 796 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 IL3P08700 152 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SLC5A2P31639 672 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SHMT2P34897 504 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 RAB28P51157 221 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 VLDLRP98155 873 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 MEF2AQ02078 507 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 SCARB2Q14108 478 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 VN1R5Q7Z5H4 357 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 TMEM179BQ7Z7N9 219 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 CLVS1Q8IUQ0 354 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 NAGSQ8N159 534 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 OR5P2Q8WZ92 322 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 EZH1Q92800 747 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 RGMAQ96B86 450 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SHDQ96IW2 340 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 IL17FQ96PD4 163 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 DOK1Q99704 481 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms