RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 APPL1Q9UKG1 709 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 C19orf53Q9UNZ5 99 aaPredicted RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 ZNF711Q9Y462 761 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 ASH1LQ9NR48 2969 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 CTAGE15A4D2H0 777 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 GPR89AB7ZAQ6 455 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 E7EVH7 732 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 H0Y3Z8 333 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 NTN3O00634 580 aaPredicted RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 LDB2O43679 373 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 NUDT21O43809 227 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 MT-CO3P00414 261 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 GPR89BP0CG08 455 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 CTAGE8P0CG41 777 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 DRD4P21917 467 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 FPR3P25089 353 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PSMA3P25788 255 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 GPR1P46091 355 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 ZNF140P52738 457 aaPredicted RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 TXNL4AP83876 142 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 CDK16Q00536 496 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PEX6Q13608 980 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 DNASE1L3Q13609 305 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PTPRCAPQ14761 206 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PYCR3Q53H96 274 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PCID2Q5JVF3 399 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 EFL1Q7Z2Z2 1120 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 RD3Q7Z3Z2 195 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 LINC00523Q86TU6 105 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 CTAGE6Q86UF2 777 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 CTAGE4Q8IX94 777 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 CEP112Q8N8E3 955 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 MCUQ8NE86 351 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 MNS1Q8NEH6 495 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 BLOC1S5Q8TDH9 187 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 THAP4Q8WY91 577 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 C3orf49Q96BT1 292 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 LRRC45Q96CN5 670 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 NXPE2Q96DL1 559 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 PRR11Q96HE9 360 aaPredicted RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 SERPINB12Q96P63 405 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 AGAP2Q99490 1192 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 C19orf43Q9BQ61 176 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 WDR83Q9BRX9 315 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 ZSCAN5AQ9BUG6 496 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 RIOK2Q9BVS4 552 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 TRIM31Q9BZY9 425 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 RMI1Q9H9A7 625 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 SAP30LQ9HAJ7 183 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
YBX3-204ENST00000366290 PKD2L2Q9NZM6 624 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 IL17CQ9P0M4 197 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 CD84Q9UIB8 345 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 SUFUQ9UMX1 484 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 GPR34Q9UPC5 381 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 SNX24Q9Y343 169 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 ARL5AQ9Y689 179 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 MGAQ8IWI9 3026 aa7.55□□□□□ -1.2
YBX3-204ENST00000366290 LOC105369274A0A096LPK9 316 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 LOC102723532A0A0G2JNH3 316 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 EFCAB8A8MWE9 144 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 B9A039 149 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 GOLGA8MH3BSY2 632 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 GAPDHSO14556 408 aaPredicted RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 MGST3O14880 152 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 SUV39H1O43463 412 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 BUD23O43709 281 aaKnown RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 FZD7O75084 574 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 PPFIA2O75334 1257 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 AVILO75366 819 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 FSHBP01225 129 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 ZNF37AP17032 561 aaPredicted RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 CA5AP35218 305 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 POLD2P49005 469 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 LMAN1P49257 510 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 PDX1P52945 283 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CLDN6P56747 220 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CRADDP78560 199 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CDH17Q12864 832 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
YBX3-204ENST00000366290 ILF3Q12906 894 aaKnown RBP eCLIP7.54□□□□□ -1.2
YBX3-204ENST00000366290 POU6F1Q14863 301 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 RPS6KA2Q15349 733 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 TAF1AQ15573 450 aaPredicted RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 CLPPQ16740 277 aaPredicted RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 ISXQ2M1V0 245 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 C14orf28Q4W4Y0 310 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 RNASE12Q5GAN4 147 aaKnown RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 FNBP1LQ5T0N5 605 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 ZDHHC20Q5W0Z9 365 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CCDC70Q6NSX1 233 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 C8orf74Q6P047 294 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 LRRC8BQ6P9F7 803 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 PPP1R21Q6ZMI0 780 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 MAATS1Q7Z4T9 603 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 TAF8Q7Z7C8 310 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 HOOK3Q86VS8 718 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 OR4N4Q8N0Y3 316 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms