RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PRRC2CQ9Y520 2896 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 CNTRLQ7Z7A1 2325 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 FLNCQ14315 2725 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 IGKV3D-11A0A0A0MRZ8 115 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 FAM227AF5H4B4 570 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 POC1B-GALNT4F8VUJ3 575 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 K7EPI3 171 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PSMD12O00232 456 aaPredicted RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 PRMT3O60678 531 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 KLHL2O95198 593 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 WDPCPO95876 746 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 INHBAP08476 426 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 GFAPP14136 432 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 MAOAP21397 527 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 CERS1P27544 350 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 CASP2P42575 452 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 MSH2P43246 934 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 MAGEA12P43365 314 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 TNFSF10P50591 281 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PLA2G16P53816 162 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 SLC26A5P58743 744 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 BTG2P78543 158 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ZNF33BQ06732 778 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ACTN3Q08043 901 aaPredicted RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 LAPTM5Q13571 262 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ACAP2Q15057 778 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 TECRLQ5HYJ1 363 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PAGE2BQ5JRK9 111 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ABHD17BQ5VST6 288 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 FCRLBQ6BAA4 426 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 KLC3Q6P597 504 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 TRIM40Q6P9F5 258 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 TAOK1Q7L7X3 1001 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PLD6Q8N2A8 252 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 OR2L5Q8NG80 312 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 M1APQ8TC57 530 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 DCAKDQ8WVC6 231 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ISL2Q96A47 359 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PTCHD1Q96NR3 888 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 GPR78Q96P69 363 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 REXO4Q9GZR2 422 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 RNF32Q9H0A6 362 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 COPS7BQ9H9Q2 264 aaPredicted RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 CLK4Q9HAZ1 481 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 KCNK13Q9HB14 408 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 MMP25Q9NPA2 562 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 NECTIN3Q9NQS3 549 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 CPSF2Q9P2I0 782 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 NFU1Q9UMS0 254 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 COPG1Q9Y678 874 aaKnown RBP9.73□□□□□ -0.85
YBX3-203ENST00000366286 IKBKGQ9Y6K9 419 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 ZGRF1Q86YA3 2104 aa9.73□□□□□ -0.85
YBX3-203ENST00000366286 A0A087WUV0 522 aaPredicted RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 A0A088AWK7 358 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 TCRBV16S1A1N1A0A5B0 115 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 CCDC189A1A4V9 331 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 LRRC14BA6NHZ5 514 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 SAGE2PA6NJ88 616 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 A8MUI8 341 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 E2F3O00716 465 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 B3GALT2O43825 422 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 KLK8O60259 260 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 PCNAP12004 261 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 EPB42P16452 691 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 ZNF10P21506 573 aaPredicted RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 HPDP32754 393 aaPredicted RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 SERPINB9P50453 376 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 HNRNPFP52597 415 aaKnown RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 ALDH18A1P54886 795 aaKnown RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 RAB38P57729 211 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 RUNX2Q13950 521 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 NAA30Q147X3 362 aaPredicted RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 HIST2H2ACQ16777 129 aaPredicted RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 PFKFB4Q16877 469 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 HIST2H2AA3Q6FI13 130 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 GRHL2Q6ISB3 625 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 H3F3CQ6NXT2 135 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 MED27Q6P2C8 311 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 ABHD17CQ6PCB6 329 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 ZNF793Q6ZN11 406 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 CRLF3Q8IUI8 442 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 SCUBE1Q8IWY4 988 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 LAS2Q8IYD9 372 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 BEST3Q8N1M1 668 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 TEX9Q8N6V9 391 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 LRRN4CLQ8ND94 238 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 TMEM52Q8NDY8 209 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 OR1N1Q8NGS0 311 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 GRHL3Q8TE85 626 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 ZNF473Q8WTR7 871 aaKnown RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 HAS2Q92819 552 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 F2RL3Q96RI0 385 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 SERINC2Q96SA4 455 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 CSF3RQ99062 836 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 BARD1Q99728 777 aaKnown RBP9.72□□□□□ -0.85
YBX3-203ENST00000366286 NPAS2Q99743 824 aa9.72□□□□□ -0.85
YBX3-203ENST00000366286 NPLQ9BXD5 320 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms