RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RHNO1Q9BSD3 238 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 CMAHPQ9Y471 501 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 PRSS21Q9Y6M0 314 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 SMAD6O43541 496 aaKnown RBP13.38□□□□□ -0.27
COL6A1-201ENST00000361866 GUCY1B2O75343 617 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 CDKN2CP42773 168 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 PRKCZQ05513 592 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 UGT3A2Q3SY77 523 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 BCL7AQ4VC05 210 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 CARD16Q5EG05 197 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 CTSL3PQ5NE16 218 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 RTP2Q5QGT7 225 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 APCDD1Q8J025 514 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 IQCF1Q8N6M8 205 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 ANKMY1Q9P2S6 941 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 GNB5O14775 395 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 TSPAN6O43657 245 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 COQ9O75208 318 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 C8orf89P0DMQ9 161 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 SLC6A4P31645 630 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 DAPP51397 102 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 SPIN4Q56A73 249 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 FAM92BQ6ZTR7 304 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 AMIGO1Q86WK6 493 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
COL6A1-201ENST00000361866 PARP16Q8N5Y8 322 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 TRPV1Q8NER1 839 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 CCDC3Q9BQI4 270 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
COL6A1-201ENST00000361866 GPSM3Q9Y4H4 160 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 SCN1AP35498 2009 aa13.38□□□□□ -0.27
COL6A1-201ENST00000361866 NUAK1O60285 661 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF623O75123 536 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 TOXO94900 526 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SELPP16109 830 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 HK3P52790 923 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RING1Q06587 406 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 LASP1Q14847 261 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 KLHL22Q53GT1 634 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SLC35F1Q5T1Q4 408 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 GPR149Q86SP6 731 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 BPIFB1Q8TDL5 484 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SIPA1Q96FS4 1042 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 MROQ9BYG7 248 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 BRINP2Q9C0B6 783 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ANKHQ9HCJ1 492 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 TAS2R7Q9NYW3 318 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SEC14L4Q9UDX3 406 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 COL16A1Q07092 1604 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 DLGAP1O14490 977 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ADAM23O75077 832 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 CRISP1P54107 249 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 EMP3P54852 163 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 CRHR2Q13324 411 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 DPY19L3Q6ZPD9 716 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ELMOD2Q8IZ81 293 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 METTL4Q8N3J2 472 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ZBED6CLQ96FA7 236 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ZSCAN5BA6NJL1 495 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PTTG1O95997 202 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 LAMP2P13473 410 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 GNG2P59768 71 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RPL6Q02878 288 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 GNA13Q14344 377 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 TRIM71Q2Q1W2 868 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SNAP47Q5SQN1 464 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 NRARPQ7Z6K4 114 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SERINC5Q86VE9 423 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PTRH1Q86Y79 214 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 DCAF4L2Q8NA75 395 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 TAC3Q9UHF0 121 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 IL20RAQ9UHF4 553 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 B3GNT3Q9Y2A9 372 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 IFT52Q9Y366 437 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RB1P06400 928 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 ETV3P41162 512 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 DGKGP49619 791 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 CDH11P55287 796 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 RAB8AP61006 207 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 NKX3-2P78367 333 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SLC3A1Q07837 685 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 AQP6Q13520 282 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 REEP3Q6NUK4 255 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PNCKQ6P2M8 343 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 Q8N402 240 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
COL6A1-201ENST00000361866 HUS1BQ8NHY5 278 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms