RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ZCCHC3Q9NUD5 404 aaKnown RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 TAPBPO15533 448 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 NOS1APO75052 506 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 CLTBP09497 229 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 CASP3P42574 277 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 PRKCZQ05513 592 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 SELENBP1Q13228 472 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 PRR23CQ6ZRP0 262 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 MMAAQ8IVH4 418 aaKnown RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 IL17FQ96PD4 163 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 TSSK6Q9BXA6 273 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 UCK2Q9BZX2 261 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 RLIMQ9NVW2 624 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 MAPRE3Q9UPY8 281 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF840PA6NDX5 716 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 NPIPB15A6NHN6 443 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 ZSCAN5BA6NJL1 495 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 PCP4L1A6NKN8 68 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 ISM1B1AKI9 464 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 FAM47E-STBD1D6RA91 191 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 TSPAN6O43657 245 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 KLKB1P03952 638 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 CCR7P32248 378 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 MARCH9Q86YJ5 346 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 OR51V1Q9H2C8 321 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 MCUBQ9NWR8 336 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 MRPL39Q9NYK5 338 aaKnown RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 SPEF1Q9Y4P9 236 aa13.14□□□□□ -0.31
SGMS1-202ENST00000361781 LAMA2P24043 3122 aaKnown RBP13.14□□□□□ -0.31
SGMS1-202ENST00000361781 COL4A5P29400 1685 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 A0A1W2PQ09 198 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SLC16A8O95907 504 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CPN2P22792 545 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ETV3P41162 512 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 HTR2BP41595 481 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 AVPR1BP47901 424 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ARF5P84085 180 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SLC14A2Q15849 920 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PNCKQ6P2M8 343 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 DPY19L3Q6ZPD9 716 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 TPRG1Q6ZUI0 275 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 HUS1BQ8NHY5 278 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 KCTD7Q96MP8 289 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CHIAQ9BZP6 476 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ARHGAP39Q9C0H5 1083 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF224Q9NZL3 707 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RPL36Q9Y3U8 105 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 A0A1W2PQL4 384 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 H0YC42 278 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PEX11BO96011 259 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 H1F0P07305 194 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 HOXB6P17509 224 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SDC2P34741 201 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 TGM4P49221 684 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RING1Q06587 406 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SLC14A1Q13336 389 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PTGES3Q15185 160 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 CDC73Q6P1J9 531 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 NCEH1Q6PIU2 408 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 USP51Q70EK9 711 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 KRT78Q8N1N4 520 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 C10orf53Q8N6V4 93 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 POP5Q969H6 163 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 NIPSNAP1Q9BPW8 284 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 MED28Q9H204 178 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 WASH4PA8MWX3 477 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PTTG1O95997 202 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 TAS1R1Q7RTX1 841 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF551Q7Z340 670 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 DOK4Q8TEW6 326 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 PCNPQ8WW12 178 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 ALOXE3Q9BYJ1 711 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-202ENST00000361781 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
SGMS1-202ENST00000361781 GABRR3A8MPY1 467 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 HOXA2O43364 376 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TOXO94900 526 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 EOMESO95936 686 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms