RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 FAM159BA6NKW6 160 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 OR2B3O76000 313 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 SLC9A3P48764 834 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 GPX6P59796 221 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 PLCXD2Q0VAA5 305 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 CANT1Q8WVQ1 401 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 SMARCD2Q92925 531 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 PEX11GQ96HA9 241 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 LRCH3Q96II8 777 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 NSUN5Q96P11 429 aaKnown RBP16.51■□□□□ 0.23
COL4A2-201ENST00000360467 DEFB126Q9BYW3 111 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 TRPV4Q9HBA0 871 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 MAGEE1Q9HCI5 957 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 C8orf4Q9NR00 106 aa16.51■□□□□ 0.23
COL4A2-201ENST00000360467 CKMT2P17540 419 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 DCDC1P59894 354 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 MSANTD1Q6ZTZ1 278 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 SLC35B2Q8TB61 432 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 ZBTB20Q9HC78 741 aaPredicted RBP16.5■□□□□ 0.23
COL4A2-201ENST00000360467 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 PTGDR2Q9Y5Y4 395 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 A0A1W2PPK0 400 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 M0R2N6 131 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 RCBTB2O95199 551 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 MECP2P51608 486 aaKnown RBP16.5■□□□□ 0.23
COL4A2-201ENST00000360467 ST3GAL3Q11203 375 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 FRMD7Q6ZUT3 714 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 NRROSQ86YC3 692 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 CXorf21Q9HAI6 301 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 A0A0U1RQS6 177 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 A0A1B0GVI7 797 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 APOL3O95236 402 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 AVL9Q8NBF6 648 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 FAM3CQ92520 227 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 PYURFQ96I23 114 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 HTR1AP08908 422 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 FOXK1P85037 733 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 IRF5Q13568 498 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 C18orf21Q32NC0 220 aaPredicted RBP16.5■□□□□ 0.23
COL4A2-201ENST00000360467 GXYLT1Q4G148 440 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 TMED4Q7Z7H5 227 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 PLEKHO2Q8TD55 490 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 APOC1P02654 83 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 RUNX3Q13761 415 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 C10orf82Q8WW14 230 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 SLC7A6OSQ96CW6 309 aaPredicted RBP16.5■□□□□ 0.23
COL4A2-201ENST00000360467 FAXDC2Q96IV6 333 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 TPT1P8Q9HAU6 139 aa16.5■□□□□ 0.23
COL4A2-201ENST00000360467 FBXO9Q9UK97 447 aaPredicted RBP16.5■□□□□ 0.23
COL4A2-201ENST00000360467 CAPN5O15484 640 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 IL3P08700 152 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 MAD2L1BPQ15013 274 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 TPRG1LQ5T0D9 272 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 IGDCC3Q8IVU1 814 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ZNF100Q8IYN0 542 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 PQLC3Q8N755 202 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 CCNL2Q96S94 520 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ENY2Q9NPA8 101 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 VNN2O95498 520 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 PFKLP17858 780 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 RABL3Q5HYI8 236 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 NSMAFQ92636 917 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 SSU72Q9NP77 194 aaKnown RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 HCFC1R1Q9NWW0 138 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 IFT52Q9Y366 437 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 HTR3EA5X5Y0 456 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 OR14I1A6ND48 311 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 OR2AT4A6NND4 320 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 RPS26P62854 115 aaKnown RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 CST6Q15828 149 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 PYHIN1Q6K0P9 492 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 KCTD9Q7L273 389 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 TAS1R3Q7RTX0 852 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 OR8H3Q8N146 312 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 GLYATL1Q969I3 302 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 HMGN1P05114 100 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 UQCRC1P31930 480 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 STARD5Q9NSY2 213 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 NUP50Q9UKX7 468 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 C6P13671 934 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 EPCAMP16422 314 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 XRCC1P18887 633 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 CD9P21926 228 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ADH7P40394 386 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 SOX2P48431 317 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ZNF678Q5SXM1 525 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ZNF852Q6ZMS4 543 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 NUP43Q8NFH3 380 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 KAT8Q9H7Z6 458 aaKnown RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-201ENST00000360467 SLCO3A1Q9UIG8 710 aa16.49■□□□□ 0.23
COL4A2-201ENST00000360467 ABCC6O95255 1503 aa16.48■□□□□ 0.23
COL4A2-201ENST00000360467 SLC33A1O00400 549 aaPredicted RBP16.48■□□□□ 0.23
COL4A2-201ENST00000360467 S100A6P06703 90 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms