RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C6orf62Q9GZU0 229 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 THSD1Q9NS62 852 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PLCXD1Q9NUJ7 323 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TDP1Q9NUW8 608 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 GULP1Q9UBP9 304 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 DUSP12Q9UNI6 340 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PCDHGA2Q9Y5H1 932 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ALPK3Q96L96 1907 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 NINQ8N4C6 2090 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 LOC100506127A0A0U1RQW1 187 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ABHD14A-ACY1A0A1B0GW23 586 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PRAMEF25A6NGN4 478 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 KPNA3O00505 521 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 CXCL14O95715 111 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 SRPRAP08240 638 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 STSP08842 583 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 DBTP11182 482 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 POU2F1P14859 743 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 NPPBP16860 134 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ITGA2P17301 1181 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PXNP49023 591 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 EIF2B2P49770 351 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 RPS3AP61247 264 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 WDR5P61964 334 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 CYP4F2P78329 520 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 RBBP4Q09028 425 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 E2F2Q14209 437 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 MPEG1Q2M385 716 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ZNF404Q494X3 552 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 IER5LQ5T953 404 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PARS2Q7L3T8 475 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 STX19Q8N4C7 294 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.23□□□□□ -1.09
RFX3-202ENST00000358730 ZNF675Q8TD23 568 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 C16orf78Q8WTQ4 265 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 GEMIN6Q8WXD5 167 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 GTPBP3Q969Y2 492 aaKnown RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 ERLEC1Q96DZ1 483 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 FAM129BQ96TA1 746 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 SPNS1Q9H2V7 528 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 EHD1Q9H4M9 534 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ANKHQ9HCJ1 492 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TMEM39AQ9NV64 488 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ZNF229Q9UJW7 825 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TBX21Q9UL17 535 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ATP11BQ9Y2G3 1177 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TRIM17Q9Y577 477 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 LRRK1Q38SD2 2015 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 FOXE1O00358 373 aaPredicted RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 GPR37L1O60883 481 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 KLK1P06870 262 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 ADORA3P0DMS8 318 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 C1GALT1C1LP0DN25 315 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 RPL3P39023 403 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 EIF2DP41214 584 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 TUBA1BP68363 451 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PDE7AQ13946 482 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 GANABQ14697 944 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 DEFB115Q30KQ5 88 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 COLEC12Q5KU26 742 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 HIST2H2AA3Q6FI13 130 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 USP43Q70EL4 1123 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 TUBA1AQ71U36 451 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 TRMT11Q7Z4G4 463 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 SLC22A16Q86VW1 577 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 LAS2Q8IYD9 372 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 CADM3Q8N126 398 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 KIAA1958Q8N8K9 716 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 ZNF296Q8WUU4 475 aaPredicted RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 SLC5A11Q8WWX8 675 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 ITPKCQ96DU7 683 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PIP5K1AQ99755 562 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 TMEM38AQ9H6F2 299 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 MYNNQ9NPC7 610 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 MIEF1Q9NQG6 463 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PAK6Q9NQU5 681 aaPredicted RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 INIPQ9NRY2 104 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 GIN1Q9NXP7 522 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 ZNF226Q9NYT6 803 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 TAS2R9Q9NYW1 312 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 RAB23Q9ULC3 237 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 FAM32AQ9Y421 112 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 MTCL1Q9Y4B5 1905 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 KIF26AQ9ULI4 1882 aaPredicted RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 PRAMEF33A0A0G2JMD5 474 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 CARNS1A5YM72 827 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 METTL15A6NJ78 407 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PRAMEF10O60809 474 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PTHP01270 115 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 RPLP0P05388 317 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 HSMCR30P0CW71 290 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 SYN1P17600 705 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 PPP5CP53041 499 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 ZNF630Q2M218 657 aaPredicted RBP8.22□□□□□ -1.09
RFX3-202ENST00000358730 MLIPQ5VWP3 458 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 FAM180BQ6P0A1 224 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 SLC46A3Q7Z3Q1 461 aa8.22□□□□□ -1.09
RFX3-202ENST00000358730 DSG4Q86SJ6 1040 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms