RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CAMK1Q14012 370 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.241e-7■■■■□ 22.7
SREBF1-202ENST00000355815 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 FRG2Q64ET8 278 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 ZNF730Q6ZMV8 503 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 FAM124AQ86V42 546 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 OR10H4Q8NGA5 316 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 OR5H6Q8NGV6 325 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 FRG2BQ96QU4 278 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 KRCC1Q9NPI7 259 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 MS4A12Q9NXJ0 267 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 TMEM181Q9P2C4 612 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 PLCL2Q9UPR0 1127 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 MROH6A6NGR9 719 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 NUAK1O60285 661 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 BMP2P12643 396 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 HPGDP15428 266 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 TNFRSF1BP20333 461 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 ZNF45Q02386 682 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 SMN1Q16637 294 aaKnown RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 LINGO2Q7L985 606 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 CHPFQ8IZ52 775 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 OR2T11Q8NH01 316 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 LKAAEAR1Q8TD35 194 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 EXOSC8Q96B26 276 aaKnown RBP13.56□□□□□ -0.24
SREBF1-202ENST00000355815 CLIP3Q96DZ5 547 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 CRELD1Q96HD1 420 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 ZNF382Q96SR6 550 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 MGLLQ99685 303 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 TTTY10Q9BZA0 68 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 LTB4R2Q9NPC1 389 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 ZDHHC3Q9NYG2 299 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 HCN2Q9UL51 889 aa13.56□□□□□ -0.24
SREBF1-202ENST00000355815 STX16O14662 325 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 KANK2Q63ZY3 851 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 PYURFQ96I23 114 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 COL21A1Q96P44 957 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TEFMQ96QE5 360 aaKnown RBP13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TUBA1CQ9BQE3 449 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 HPF1Q9NWY4 346 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 PCDHGB6Q9Y5F9 930 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 L7N2F9 121 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 EIF3FO00303 357 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-202ENST00000355815 CAPNS1P04632 268 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 CD40LGP29965 261 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
SREBF1-202ENST00000355815 MAGEA2P43356 314 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TSPAN5P62079 268 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 HSPB3Q12988 150 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 NHSL2Q5HYW2 709 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 MINDY1Q8N5J2 469 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TCEANCQ8N8B7 351 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 DCAF4L2Q8NA75 395 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 GPR26Q8NDV2 337 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 PROKR1Q8TCW9 393 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TMEM125Q96AQ2 219 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 FUZQ9BT04 418 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 INPP5KQ9BT40 448 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 SLC35C2Q9NQQ7 365 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 GPR83Q9NYM4 423 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 DNAH12Q6ZR08 3092 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 H0YAE9 185 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TYRP14679 529 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 FPR1P21462 350 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TGFBR2P37173 567 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
SREBF1-202ENST00000355815 CREMQ03060 361 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 DSC1Q08554 894 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TEAD2Q15562 447 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 ARL9Q6T311 187 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 MTSS1LQ765P7 747 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 CADM3Q8N126 398 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 MAL2Q969L2 176 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 BRD7Q9NPI1 651 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
SREBF1-202ENST00000355815 TLL1O43897 1013 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 B3GALT4O96024 378 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 CSN2P05814 226 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 GSTM2P28161 218 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 ZNF140P52738 457 aaPredicted RBP13.54□□□□□ -0.24
SREBF1-202ENST00000355815 CARD16Q5EG05 197 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 GCNT6Q5T4J0 391 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 CLECL1Q8IZS7 167 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 C12orf66Q96MD2 445 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 DRGXA6NNA5 263 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 EVI2BP34910 448 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 CTSL3PQ5NE16 218 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 MANEALQ5VSG8 457 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
SREBF1-202ENST00000355815 ADGRG5Q8IZF4 528 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms