RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 OR5P2Q8WZ92 322 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 TMEM38AQ9H6F2 299 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 YY1AP1Q9H869 796 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 TPT1P8Q9HAU6 139 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 CPNE7Q9UBL6 633 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 CROCCQ5TZA2 2017 aa16.41■□□□□ 0.22
VPS13B-201ENST00000355155 CEP192Q8TEP8 1941 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 SZT2Q5T011 3432 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 DPM1O60762 260 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 RBBP4Q09028 425 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 UBXN2BQ14CS0 331 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 VMACQ2NL98 169 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.4■□□□□ 0.22
VPS13B-201ENST00000355155 CCDC80Q76M96 950 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 IFNEQ86WN2 208 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 MARVELD2Q8N4S9 558 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 OR52N2Q8NGI0 321 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 GATA6Q92908 595 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 GMNNO75496 209 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 WNT1P04628 370 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 PCGF2P35227 344 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 MAPK12P53778 367 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 NAGSQ8N159 534 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 ICA1LQ8NDH6 482 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 KCNC2Q96PR1 638 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 TEFMQ96QE5 360 aaKnown RBP16.4■□□□□ 0.22
VPS13B-201ENST00000355155 FOXQ1Q9C009 403 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 ABCG4Q9H172 646 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 VCXQ9H320 206 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 TAS2R9Q9NYW1 312 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 ACTR10Q9NZ32 417 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 ASB4Q9Y574 426 aa16.4■□□□□ 0.22
VPS13B-201ENST00000355155 K7ESF4 209 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TNFRSF21O75509 655 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 UGT2B7P16662 529 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 GAB1Q13480 694 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 GPR18Q14330 331 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 RNF44Q7L0R7 432 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 OR4E2Q8NGC2 313 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 SNX19Q92543 992 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 RNF145Q96MT1 663 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TCEAL2Q9H3H9 227 aaPredicted RBP16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TBC1D17Q9HA65 648 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 CCDC163A0A0D9SF12 145 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 SAP18O00422 153 aaKnown RBP16.39■□□□□ 0.21
VPS13B-201ENST00000355155 ACOX3O15254 700 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TMPRSS11DO60235 418 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TIPRLO75663 272 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 RGNQ15493 299 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 FAM98BQ52LJ0 330 aaKnown RBP16.39■□□□□ 0.21
VPS13B-201ENST00000355155 FCRL6Q6DN72 434 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 ANKRD26P1Q6NSI1 321 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 ZNF793Q6ZN11 406 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 VN1R4Q7Z5H5 301 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.39■□□□□ 0.21
VPS13B-201ENST00000355155 SLC30A8Q8IWU4 369 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 GAL3ST3Q96A11 431 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 LRRC61Q9BV99 259 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 BATF3Q9NR55 127 aa16.39■□□□□ 0.21
VPS13B-201ENST00000355155 TNRC6BQ9UPQ9 1833 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 UQCRC2P22695 453 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 FASLGP48023 281 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 STXBP1P61764 594 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 HBA1P69905 142 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 MC1RQ01726 317 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 MLLT1Q03111 559 aaPredicted RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 EEF1A2Q05639 463 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 DNAJC14Q6Y2X3 702 aaPredicted RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 RD3Q7Z3Z2 195 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 OR4A15Q8NGL6 344 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 FAM110BQ8TC76 370 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 AURKBQ96GD4 344 aaPredicted RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 ROGDIQ9GZN7 287 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 ENAMQ9NRM1 1142 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 AASDHPPTQ9NRN7 309 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 GPATCH2Q9NW75 528 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 LYARQ9NX58 379 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 TMEM131Q92545 1883 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 C2orf74A8MZ97 194 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 GUCY1B2O75343 617 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 VIPP01282 170 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 GSNP06396 782 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 CD38P28907 300 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 PLIN5Q00G26 463 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 TMTC4Q5T4D3 741 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 FBXO42Q6P3S6 717 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 ZNF621Q6ZSS3 439 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 SIX5Q8N196 739 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 OR2A5Q96R48 311 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 SORBS1Q9BX66 1292 aaKnown RBP16.38■□□□□ 0.21
VPS13B-201ENST00000355155 SYNPO2LQ9H987 977 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 SH3BP4Q9P0V3 963 aa16.38■□□□□ 0.21
VPS13B-201ENST00000355155 ARHGAP10A1A4S6 786 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms