RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ITM2AO43736 263 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 BRINP1O60477 761 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 RGRP47804 291 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 DNASE1L1P49184 302 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SGSHP51688 502 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 CTSCP53634 463 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 ARMCX4Q5H9R4 360 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 OR4C11Q6IEV9 310 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 TMPRSS11AQ6ZMR5 421 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 CXXC5Q7LFL8 322 aaKnown RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 MCATQ8IVS2 390 aaKnown RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 OLFM1Q99784 485 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 TIMM29Q9BSF4 260 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 CENPMQ9NSP4 180 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 FAM120CQ9NX05 1096 aaKnown RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 ACAD8Q9UKU7 415 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 F5P12259 2224 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 A0A0A6YYC8 382 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 CENPXA8MT69 81 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 I3L1I5 382 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 SOX1O00570 391 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 HOXC11O43248 304 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 PORP16435 677 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 IGFBP5P24593 272 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 CDKN2DP55273 166 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SRYQ05066 204 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SLC5A9Q2M3M2 681 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 NDUFAF6Q330K2 333 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.33□□□□□ -0.92
GABPA-201ENST00000354828 KCTD8Q6ZWB6 473 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 ZDHHC21Q8IVQ6 265 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 ARHGAP12Q8IWW6 846 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.33□□□□□ -0.92
GABPA-201ENST00000354828 RAB8BQ92930 207 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 TTYH1Q9H313 450 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 LTB4R2Q9NPC1 389 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 RASSF1Q9NS23 344 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 PDP2Q9P2J9 529 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 RP1L1Q8IWN7 2480 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 IRGMA1A4Y4 181 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 PVRP15151 417 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 TLR1Q15399 786 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 MTX3Q5HYI7 312 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SLC5A8Q8N695 610 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 NFKBIDQ8NI38 313 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SH3GL2Q99962 352 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 ZIM2Q9NZV7 527 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 UPB1Q9UBR1 384 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 LHX3Q9UBR4 397 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SHOX2O60902 331 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 PDYNP01213 254 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 MTHFD1P11586 935 aaKnown RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 ARFIP1P53367 373 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 E2F1Q01094 437 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 RIN1Q13671 783 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 PUM1Q14671 1186 aaKnown RBP eCLIP9.33□□□□□ -0.92
GABPA-201ENST00000354828 MED22Q15528 200 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 CARTPTQ16568 116 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SMU1Q2TAY7 513 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 SPANXN4Q5MJ08 99 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 LCN1P1Q5VSP4 162 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 TRIQKQ629K1 86 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 ZNF57Q68EA5 555 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 ZNF382Q96SR6 550 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 TPT1P8Q9HAU6 139 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 AP1M2Q9Y6Q5 423 aa9.33□□□□□ -0.92
GABPA-201ENST00000354828 MYO5AQ9Y4I1 1855 aaKnown RBP9.33□□□□□ -0.92
GABPA-201ENST00000354828 COL11A2P13942 1736 aaPredicted RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 ARAP2Q8WZ64 1704 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 AURKAO14965 403 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 CPNE3O75131 537 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 ENTPD5O75356 428 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TRIM3O75382 744 aaPredicted RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 ATP6V1G2O95670 118 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ACVR2AP27037 513 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 UFM1P61960 85 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PEG10Q86TG7 708 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 TMEM135Q86UB9 458 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TMEM151BQ8IW70 566 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ZNF100Q8IYN0 542 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 OR13H1Q8NG92 308 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 OR2L2Q8NH16 312 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 MOAP1Q96BY2 351 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TMEM9BQ9NQ34 198 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 STOX2Q9P2F5 926 aaPredicted RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 PDE10AQ9Y233 779 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 FADS3Q9Y5Q0 445 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 COL4A1P02462 1669 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 CSTAP01040 98 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PGRP06401 933 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 GLULP15104 373 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TCN2P20062 427 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TIA1P31483 386 aaKnown RBP eCLIP9.32□□□□□ -0.92
GABPA-201ENST00000354828 ACSL1P33121 698 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RCVRNP35243 200 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 RCAN2Q14206 197 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms