RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FAM124AQ86V42 546 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 MMAAQ8IVH4 418 aaKnown RBP21.3■■□□□ 1
NKX2-1-201ENST00000354822 TRUB1Q8WWH5 349 aaKnown RBP21.3■■□□□ 1
NKX2-1-201ENST00000354822 TFGQ92734 400 aaPredicted RBP21.3■■□□□ 1
NKX2-1-201ENST00000354822 HSPBAP1Q96EW2 488 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 ZFYVE19Q96K21 471 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 RHBGQ9H310 441 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 MIEF1Q9NQG6 463 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 FAM20BO75063 409 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 SEMA3DO95025 777 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 DDX5P17844 614 aaKnown RBP21.3■■□□□ 1
NKX2-1-201ENST00000354822 PXNP49023 591 aaPredicted RBP21.3■■□□□ 1
NKX2-1-201ENST00000354822 TMED1Q13445 227 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 GPM6BQ13491 265 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 CTF1Q16619 201 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 LINC00299Q6ZSB3 139 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 SLC9B2Q86UD5 537 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 SMARCD2Q92925 531 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 PPP1R14BQ96C90 147 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 ASB16Q96NS5 453 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 PCBD2Q9H0N5 130 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 PELI2Q9HAT8 420 aa21.3■■□□□ 1
NKX2-1-201ENST00000354822 SLC22A1O15245 554 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 GABARAPO95166 117 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ERGP11308 486 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 CD6P30203 668 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 BMXP51813 675 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 EEF1A2Q05639 463 aaKnown RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 IER5LQ5T953 404 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 TSEN54Q7Z6J9 526 aaKnown RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 C17orf64Q86WR6 236 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 LMNTD1Q8N9Z9 388 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ZNF740Q8NDX6 193 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 OR5AR1Q8NGP9 310 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 NFKBIDQ8NI38 313 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ZNF300Q96RE9 604 aaPredicted RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 NECTIN3Q9NQS3 549 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 TMEM98Q9Y2Y6 226 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 OTOL1A6NHN0 477 aaPredicted RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 ANKDD1BA6NHY2 528 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 IL3P08700 152 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 UQCRC2P22695 453 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 EPHA2P29317 976 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 SERPINB1P30740 379 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 P2RY2P41231 377 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ST13P50502 369 aaKnown RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 SLC5A12Q1EHB4 618 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 FAM46CQ5VWP2 391 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 PNCKQ6P2M8 343 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 VN1R5Q7Z5H4 357 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ADGRD2Q7Z7M1 963 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 LRRTM4Q86VH4 590 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 RNF130Q86XS8 419 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 C12orf76Q8N812 135 aaPredicted RBP21.29■■□□□ 1
NKX2-1-201ENST00000354822 TAMM41Q96BW9 452 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 PLEKHA8Q96JA3 519 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 AIF1LQ9BQI0 150 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 ANGPT4Q9Y264 503 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 TESMINQ9Y4I5 508 aa21.29■■□□□ 1
NKX2-1-201ENST00000354822 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
NKX2-1-201ENST00000354822 TBC1D3BA6NDS4 549 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 ZNF12P17014 697 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 SPCS2Q15005 226 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 PDGFRLQ15198 375 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 LAIR1Q6GTX8 287 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 Q6ZNX1 250 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 PAGE2Q7Z2X7 111 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 ARMC8Q8IUR7 673 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 DNAJC5GQ8N7S2 189 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 GEMIN6Q8WXD5 167 aaKnown RBP21.28■■□□□ 1
NKX2-1-201ENST00000354822 IL17FQ96PD4 163 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 FEVQ99581 238 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 MYOCQ99972 504 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 NLNQ9BYT8 704 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 SLC6A16Q9GZN6 736 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 MAP4K5Q9Y4K4 846 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 PCDHGA6Q9Y5G7 932 aa21.28■■□□□ 1
NKX2-1-201ENST00000354822 TBX19O60806 448 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 CA3P07451 260 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 ARAFP10398 606 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 AQP6Q13520 282 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 DEPDC1Q5TB30 811 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 CCDC71Q8IV32 467 aaPredicted RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 P3H2Q8IVL5 708 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 OR10G2Q8NGC3 310 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 OR5K2Q8NHB8 316 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 QRFPRQ96P65 431 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 PITHD1Q9GZP4 211 aaPredicted RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 OBP2AQ9NY56 170 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 POFUT2Q9Y2G5 429 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 TDRKHQ9Y2W6 561 aaKnown RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 MKI67P46013 3256 aaKnown RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 GRXCR1A8MXD5 290 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 PCDHGA12O60330 932 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 WBP4O75554 376 aaKnown RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 TPP2P29144 1249 aaPredicted RBP21.27■■□□□ 1
NKX2-1-201ENST00000354822 CLCA4Q14CN2 919 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 MICAQ29983 383 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 MLIPQ5VWP3 458 aa21.27■■□□□ 1
NKX2-1-201ENST00000354822 METRNLQ641Q3 311 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms