RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 BCAS2O75934 225 aaPredicted RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 HSD17B1P14061 328 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 ST6GAL1P15907 406 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 GSK3BP49841 420 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 EEFSECP57772 596 aaKnown RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 PDE7AQ13946 482 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 RCN1Q15293 331 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 MUM1Q2TAK8 710 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 FRMPD2BQ6IN97 320 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 ARL10Q8N8L6 244 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 KCT2Q8NC54 265 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 SRFBP1Q8NEF9 429 aaKnown RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 OR8K5Q8NH50 307 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 RERGQ96A58 199 aaPredicted RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 MTERF3Q96E29 417 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 ZC3H10Q96K80 434 aaKnown RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 GBP5Q96PP8 586 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 KCTD14Q9BQ13 255 aaPredicted RBP19.55■□□□□ 0.72
TRIM4-202ENST00000354241 PIF1Q9H611 641 aa19.55■□□□□ 0.72
TRIM4-202ENST00000354241 ADAMTS9Q9P2N4 1935 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 LOC105369274A0A096LPK9 316 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 LOC102723532A0A0G2JNH3 316 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 PRSS51A0A1B0GVH4 220 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 P2RX6O15547 441 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 GIMD1P0DJR0 217 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TRPC1P48995 793 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 ALDH9A1P49189 494 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TGM3Q08188 693 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 SIM2Q14190 667 aaPredicted RBP19.54■□□□□ 0.72
TRIM4-202ENST00000354241 SPATS1Q496A3 300 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 RUNDC3AQ59EK9 446 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 RNF44Q7L0R7 432 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 DGLUCYQ7Z3D6 616 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 PACS2Q86VP3 889 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TICAM1Q8IUC6 712 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 OR4N4Q8N0Y3 316 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TM4SF19Q96DZ7 209 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TBCDQ9BTW9 1192 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 THUMPD3Q9BV44 507 aaKnown RBP19.54■□□□□ 0.72
TRIM4-202ENST00000354241 PRDM7Q9NQW5 492 aa19.54■□□□□ 0.72
TRIM4-202ENST00000354241 TRBV5-3A0A0A0MS03 114 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 NVLO15381 856 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SH3BP5O60239 455 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 STAMBPO95630 424 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 EIF2S1P05198 315 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 HIST1H1TP22492 207 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 EPHA8P29322 1005 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ALDH4A1P30038 563 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 CNR2P34972 360 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 RELAQ04206 551 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 TRAP1Q12931 704 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 HEPACAMQ14CZ8 416 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 FAM92BQ6ZTR7 304 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 GATAD2AQ86YP4 633 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SLC35F3Q8IY50 421 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 CAMKVQ8NCB2 501 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 GAL3ST3Q96A11 431 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 CIDECQ96AQ7 238 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 AURKBQ96GD4 344 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 COPS7BQ9H9Q2 264 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 TEX10Q9NXF1 929 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 EGFL7Q9UHF1 273 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 WBP11Q9Y2W2 641 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 NUP214P35658 2090 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 H0YGG7 62 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 DNAJA2O60884 412 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 FKBP6O75344 327 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 FAM58BPP0C7Q3 252 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ZNF888P0CJ79 500 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 DDCP20711 480 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ATP5A1P25705 553 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 CERS1P27544 350 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 PTPN6P29350 595 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SOX11P35716 441 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 GSTM5P46439 218 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ARFIP1P53367 373 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ARF3P61204 181 aaPredicted RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 TRA2BP62995 288 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 BNIP2Q12982 314 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SLAMF1Q13291 335 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SLC9A5Q14940 896 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ZNF621Q6ZSS3 439 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ACOT4Q8N9L9 421 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 C19orf47Q8N9M1 422 aaKnown RBP19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ZCCHC10Q8TBK6 192 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 PYDC1Q8WXC3 89 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 CCDC115Q96NT0 180 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 TRAPPC9Q96Q05 1148 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 MAP3K3Q99759 626 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 SH3GL1Q99961 368 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ECSITQ9BQ95 431 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 ZSCAN32Q9NX65 697 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 BTNL2Q9UIR0 455 aa19.53■□□□□ 0.72
TRIM4-202ENST00000354241 MUC3AQ02505 3323 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 NCOR1O75376 2440 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 SCN3AQ9NY46 2000 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 A0A1B0GTQ1 180 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 SLC9B1P1A6NJY1 282 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 RNASET2O00584 256 aaKnown RBP19.52■□□□□ 0.72
TRIM4-202ENST00000354241 MYF5P13349 255 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms