RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PLCXD1Q9NUJ7 323 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 ANKMY1Q9P2S6 941 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF282Q9UDV7 671 aaPredicted RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SNX8Q9Y5X2 465 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 KCNE2Q9Y6J6 123 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SLC5A10A0PJK1 596 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 CCL16O15467 120 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SSX4O60224 188 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 MRPS14O60783 128 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 ALDH1A1P00352 501 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 ALOX12P18054 663 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 FEN1P39748 380 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 TBPL1P62380 186 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 GCNT6Q5T4J0 391 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 C10orf62Q5T681 223 aaPredicted RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 MED27Q6P2C8 311 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 NEK10Q6ZWH5 1172 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 WDR53Q7Z5U6 358 aaPredicted RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SLC44A2Q8IWA5 706 aaPredicted RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 FAM129BQ96TA1 746 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 IMPAD1Q9NX62 359 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SPG21Q9NZD8 308 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 IFT52Q9Y366 437 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 CHD7Q9P2D1 2997 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 NINQ8N4C6 2090 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 GOLGA4Q13439 2230 aaKnown RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 HTR3EA5X5Y0 456 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 DPM1O60762 260 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CXCL10P02778 98 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 RPLP0P05388 317 aaKnown RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 SERPINB1P30740 379 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 SOAT1P35610 550 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 UGT2B10P36537 528 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CDK6Q00534 326 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 KCNC3Q14003 757 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 DMC1Q14565 340 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 MED22Q15528 200 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 ZDHHC20Q5W0Z9 365 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CAMKMTQ7Z624 323 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CFAP206Q8IYR0 622 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 SLC35B4Q969S0 331 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 IL4I1Q96RQ9 567 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 FAM32AQ9Y421 112 aaKnown RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CTDSP2O14595 271 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 RECKO95980 971 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CHI3L1P36222 383 aaPredicted RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 CSNK2BP67870 215 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 TUBA1BP68363 451 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 EEF1A2Q05639 463 aaKnown RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 TEAD4Q15561 434 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 UAP1L1Q3KQV9 507 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 SPIN4Q56A73 249 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 RPS26P11Q5JNZ5 115 aaPredicted RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 TUBA1AQ71U36 451 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 MINDY2Q8NBR6 621 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 KCNS3Q9BQ31 491 aa17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 GPC6Q9Y625 555 aaPredicted RBP17.32■□□□□ 0.36
PTP4A3-202ENST00000349124 K7ESM1 405 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 FURINP09958 794 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ANXA8P13928 327 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 TYRP14679 529 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 HOXD10P28358 340 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF763Q0D2J5 394 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 USP43Q70EL4 1123 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 Q8N9G6 341 aaPredicted RBP17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 AQP11Q8NBQ7 271 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 C16orf78Q8WTQ4 265 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ATL1Q8WXF7 558 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 FCGR1BQ92637 280 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 GLYATL1Q969I3 302 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 IL17FQ96PD4 163 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 PCDHGA3Q9Y5H0 932 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 LRG1P02750 347 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 PPIBP23284 216 aaKnown RBP17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 RCVRNP35243 200 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 HOXD12P35452 270 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 BCDIN3DQ7Z5W3 292 aaKnown RBP17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■□□ 18.9
PTP4A3-202ENST00000349124 OR52N2Q8NGI0 321 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 PPCDCQ96CD2 204 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 COL21A1Q96P44 957 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ACAT2Q9BWD1 397 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ATP6V1HQ9UI12 483 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 POFUT2Q9Y2G5 429 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 DNAH14Q0VDD8 3507 aa17.31■□□□□ 0.36
PTP4A3-202ENST00000349124 ATG13O75143 517 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 C1orf105O95561 183 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 C8AP07357 584 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 HSD3B1P14060 373 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 HSD3B2P26439 372 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 CNR2P34972 360 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 TSTQ16762 297 aaKnown RBP17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 LY6G5CQ5SRR4 150 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF362Q5T0B9 420 aaPredicted RBP17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms