RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SP3Q02447 781 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF177Q13360 481 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 LARS2Q15031 903 aaKnown RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 LRRC66Q68CR7 880 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ABI3BPQ7Z7G0 1075 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PGBD3Q8N328 593 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PANX1Q96RD7 426 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 C17orf62Q9BQA9 187 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ACPTQ9BZG2 426 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 FCF1Q9Y324 198 aaKnown RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CLCA3PQ9Y6N3 262 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 A0A1W2PQL4 384 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PDPK1O15530 556 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CLDN11O75508 207 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 TNFRSF21O75509 655 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 NUDT7P0C024 238 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 TSPAN19P0C672 248 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 NAGAP17050 411 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CHMP24386 653 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PXNP49023 591 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CRYBA2P53672 197 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CPSF6Q16630 551 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 TSEN54Q7Z6J9 526 aaKnown RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ULK4Q96C45 1275 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ZSCAN5AQ9BUG6 496 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 P2RY12Q9H244 342 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ING3Q9NXR8 418 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ASIC5Q9NY37 505 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 B3GNT2Q9NY97 397 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 EIF3KQ9UBQ5 218 aaKnown RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF840PA6NDX5 716 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 K7ERQ8 282 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 NBNO60934 754 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 GLUD1P00367 558 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 GPNMBQ14956 572 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 FAM151BQ6UXP7 276 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 CARNMT1Q8N4J0 409 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 FAM181AQ8N9Y4 354 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 CASD1Q96PB1 797 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 C1QTNF7Q9BXJ2 289 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 ADGRE3Q9BY15 652 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 MCUBQ9NWR8 336 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 FRMPD3Q5JV73 1810 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 A0A1W2PQ45 241 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-202ENST00000348987 A0A1W2PQY0 241 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 FPGTO14772 594 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 SCG5P05408 212 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 CRYBB2P43320 205 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 ALDH6A1Q02252 535 aaKnown RBP17.9■□□□□ 0.46
SCARF1-202ENST00000348987 SPPL2AQ8TCT8 520 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
SCARF1-202ENST00000348987 TM6SF2Q9BZW4 377 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 TRIM45Q9H8W5 580 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-202ENST00000348987 STARD7Q9NQZ5 370 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 TMEM161AQ9NX61 479 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 IL17CQ9P0M4 197 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 CLEC2DQ9UHP7 191 aa17.9■□□□□ 0.46
SCARF1-202ENST00000348987 SMIM30A4D0T7 59 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 C2orf78A6NCI8 922 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 CDRT1O95170 752 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 ACADMP11310 421 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 PSMA1P25786 263 aaKnown RBP17.89■□□□□ 0.46
SCARF1-202ENST00000348987 PTGER3P43115 390 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 CLCN4P51793 760 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 PLAG1Q6DJT9 500 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 ERICH5Q6P6B1 374 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 BTN2A2Q8WVV5 523 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 GFM1Q96RP9 751 aaKnown RBP17.89■□□□□ 0.46
SCARF1-202ENST00000348987 RERGLQ9H628 205 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 WWOXQ9NZC7 414 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 PRSS21Q9Y6M0 314 aa17.89■□□□□ 0.46
SCARF1-202ENST00000348987 A8MX80 341 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 UPK3BL1B0FP48 263 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 UPK3BL2E5RIL1 263 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 PLD2O14939 933 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 SUV39H1O43463 412 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 CLEC2LP0C7M8 214 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 ZNF250P15622 560 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 CST5P28325 142 aaPredicted RBP17.89■□□□□ 0.45
SCARF1-202ENST00000348987 GKP32189 559 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 DGKEP52429 567 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 GDPD1Q8N9F7 314 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 OR9Q2Q8NGE9 314 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 MAL2Q969L2 176 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 FBXO9Q9UK97 447 aaPredicted RBP17.89■□□□□ 0.45
SCARF1-202ENST00000348987 NDRG2Q9UN36 371 aaKnown RBP17.89■□□□□ 0.45
SCARF1-202ENST00000348987 VPS9D1Q9Y2B5 631 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 DHRS7Q9Y394 339 aa17.89■□□□□ 0.45
SCARF1-202ENST00000348987 IQCMA0A1B0GVH7 501 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 ZNF670-ZNF695F2Z2N8 137 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 PDE9AO76083 593 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 CPSF4O95639 269 aaKnown RBP17.88■□□□□ 0.45
SCARF1-202ENST00000348987 PDYNP01213 254 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 CDH12P55289 794 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 ZXDBP98169 803 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCARF1-202ENST00000348987 FBXO22Q8NEZ5 403 aa17.88■□□□□ 0.45
SCARF1-202ENST00000348987 TMEM245Q9H330 911 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms