RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CD160O95971 181 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 ENGP17813 658 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CSNK1DP48730 415 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 RAB25P57735 213 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 PSPHP78330 225 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 LRRC74AQ0VAA2 488 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CDH18Q13634 790 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 TSTQ16762 297 aaKnown RBP15.25■□□□□ 0.03
HMGA1-202ENST00000347617 C18orf21Q32NC0 220 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-202ENST00000347617 WDR45BQ5MNZ6 344 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
HMGA1-202ENST00000347617 RETSATQ6NUM9 610 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 VTCN1Q7Z7D3 282 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 PTOV1Q86YD1 416 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CMTM8Q8IZV2 173 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 OR10G2Q8NGC3 310 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 ASB15Q8WXK1 588 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 FCRL1Q96LA6 429 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 DMRTB1Q96MA1 342 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 FRMD6Q96NE9 622 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 C2orf49Q9BVC5 232 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CLN6Q9NWW5 311 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 GPR83Q9NYM4 423 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 KLHL20Q9Y2M5 609 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 TMA7Q9Y2S6 64 aaKnown RBP15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CMAHPQ9Y471 501 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 MAGEB17A8MXT2 336 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 LOC730098B7Z3J9 87 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF197O14709 1029 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ICMTO60725 284 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 TMCC2O75069 709 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 DNTTP04053 509 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 SCG5P05408 212 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 MYL9P24844 172 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 WEE1P30291 646 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 IFNA8P32881 189 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 PCGF2P35227 344 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 CDKN2CP42773 168 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 CDKN1CP49918 316 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ERVK-21P61565 698 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 TNK1Q13470 666 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 MEDAGQ5VYS4 303 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 RNLSQ5VYX0 342 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 RFPL4BQ6ZWI9 263 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF551Q7Z340 670 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-202ENST00000347617 OR10Q1Q8NGQ4 319 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 NEDD4LQ96PU5 975 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 KCNS3Q9BQ31 491 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 TTYH2Q9BSA4 534 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 DOHHQ9BU89 302 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ASPNQ9BXN1 380 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ACPTQ9BZG2 426 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF556Q9HAH1 456 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 TEX51A0A1B0GUA7 166 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 MOSPD3O75425 235 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 STK16O75716 305 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 DIRAS1O95057 198 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 CPN2P22792 545 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 KCNJ10P78508 379 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 QPRTQ15274 297 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 PLAG1Q6DJT9 500 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 FAM92BQ6ZTR7 304 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 CREB3L2Q70SY1 520 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 LRRC70Q7Z2Q7 622 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 FAM124AQ86V42 546 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 BBS7Q8IWZ6 715 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 RBFAQ8N0V3 343 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 OR9Q1Q8NGQ5 310 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 CLHC1Q8NHS4 586 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 BTN2A2Q8WVV5 523 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 METTL2AQ96IZ6 378 aaKnown RBP15.24■□□□□ 0.03
HMGA1-202ENST00000347617 PANX1Q96RD7 426 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 FEVQ99581 238 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 MYOCQ99972 504 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 RNF121Q9H920 327 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 FARSBQ9NSD9 589 aaKnown RBP15.24■□□□□ 0.03
HMGA1-202ENST00000347617 GPRC5BQ9NZH0 403 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 KLHL42Q9P2K6 505 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 PPT2Q9UMR5 302 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 DLGAP4Q9Y2H0 992 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 PCDHB11Q9Y5F2 797 aa15.24■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF106Q9H2Y7 1883 aaKnown RBP15.23■□□□□ 0.03
HMGA1-202ENST00000347617 A0A0U1RQS6 177 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 ARRDC5A6NEK1 342 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 ANKRD66B4E2M5 251 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 B8ZZF3 427 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF670-ZNF695F2Z2N8 137 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SHOXO15266 292 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 GRM6O15303 877 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 PROM1O43490 865 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 PRLP01236 227 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 RHOP08100 348 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 HSMCR30P0CW71 290 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 CBSLP0DN79 551 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SYN1P17600 705 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SDC1P18827 310 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 CHMP24386 653 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 CBSP35520 551 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 CCR2P41597 374 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 MAPK8P45983 427 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms