RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
SGCA-202ENST00000344627 SLC19A2O60779 497 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SERPINA6P08185 405 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 STMN1P16949 149 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 HTR1EP28566 365 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
SGCA-202ENST00000344627 SSTR2P30874 369 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 BTG2P78543 158 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 PMP22Q01453 160 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.54
SGCA-202ENST00000344627 FBXO48Q5FWF7 155 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 RAPH1Q70E73 1250 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 CTAGE6Q86UF2 777 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 CRLF3Q8IUI8 442 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.65□□□□□ -0.54
SGCA-202ENST00000344627 KRT78Q8N1N4 520 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 PPM1NQ8N819 430 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 POGLUT1Q8NBL1 392 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 PHF10Q8WUB8 498 aaKnown RBP11.65□□□□□ -0.54
SGCA-202ENST00000344627 RHBDF1Q96CC6 855 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SCMH1Q96GD3 660 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 MAGED4Q96JG8 741 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 GPR137Q96N19 417 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 CAPS2Q9BXY5 557 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 SLC6A16Q9GZN6 736 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 CDCP1Q9H5V8 836 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 ZNF835Q9Y2P0 537 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 GABRR3A8MPY1 467 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 MAOAP21397 527 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 GP5P40197 560 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 HSPA7P48741 367 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 SLC26A5P58743 744 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
SGCA-202ENST00000344627 TUBA3CQ13748 450 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 TGFBIQ15582 683 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 OR1C1Q15619 314 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 TUBA3EQ6PEY2 450 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 TMIGD1Q6UXZ0 262 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 SLCO4C1Q6ZQN7 724 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 TCAIMQ8N3R3 496 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 TTLQ8NG68 377 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 CREB3L4Q8TEY5 395 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 ESAMQ96AP7 390 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 SIGLEC12Q96PQ1 595 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 RBBP8Q99708 897 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 DNAJC11Q9NVH1 559 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
SGCA-202ENST00000344627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
SGCA-202ENST00000344627 A0A088AWK7 358 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 TAPBPO15533 448 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 ERI3O43414 337 aaKnown RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 MAN1A2O60476 641 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 CCNT2O60583 730 aaKnown RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 STK16O75716 305 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 FAM155BO75949 473 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 GSTA2P09210 222 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 ZNF10P21506 573 aaPredicted RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 MST1P26927 711 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SPRP35270 261 aaPredicted RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 CD96P40200 585 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 MAGEA4P43358 317 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SLC6A12P48065 614 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 PLA2G16P53816 162 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 RIPPLY3P57055 190 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 RAB10P61026 200 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 ATP6V0D1P61421 351 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 CAV1Q03135 178 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 HYAL2Q12891 473 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SLMAPQ14BN4 828 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 OR4D1Q15615 310 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 MAPKAPK3Q16644 382 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 HIST2H2ACQ16777 129 aaPredicted RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 XKR6Q5GH73 641 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 GRTP1Q5TC63 336 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 HIST2H2AA3Q6FI13 130 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SPINK14Q6IE38 97 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SULT1C3Q6IMI6 304 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 QSOX2Q6ZRP7 698 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 RPS19BP1Q86WX3 136 aaKnown RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 SPPL2CQ8IUH8 684 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 KLHDC8AQ8IYD2 350 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 CA13Q8N1Q1 262 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 GHDCQ8N2G8 530 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 MDS2Q8NDY4 140 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 C7orf57Q8NEG2 295 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 MRRFQ96E11 262 aaKnown RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 C14orf79Q96F83 325 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 GPR22Q99680 433 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 SPOCK3Q9BQ16 436 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 HES7Q9BYE0 225 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 COPS7BQ9H9Q2 264 aaPredicted RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 PRDM9Q9NQV7 894 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 PNO1Q9NRX1 252 aaKnown RBP11.63□□□□□ -0.55
SGCA-202ENST00000344627 GRHL1Q9NZI5 618 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms