RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 MLLT10P55197 1068 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 SLC35A2P78381 396 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 NPRL3Q12980 569 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 PDE7AQ13946 482 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 TEAD4Q15561 434 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 NPTX1Q15818 432 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 KIAA1614Q5VZ46 1190 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 FAHD1Q6P587 224 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL9A3-201ENST00000343916 GOT1L1Q8NHS2 421 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-201ENST00000343916 TFGQ92734 400 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-201ENST00000343916 FGF13Q92913 245 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 GPN2Q9H9Y4 310 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-201ENST00000343916 TAC3Q9UHF0 121 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 TRPM6Q9BX84 2022 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 GPR37L1O60883 481 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 ITIH1P19827 911 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 SOAT1P35610 550 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PRIM2P49643 509 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 RPP38P78345 283 aaKnown RBP18.52■□□□□ 0.56
COL9A3-201ENST00000343916 ATP1A4Q13733 1029 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 SCARB2Q14108 478 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 GPR153Q6NV75 609 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 C16orf87Q6PH81 154 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 CCDC81Q6ZN84 652 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF540Q8NDQ6 660 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 TAMM41Q96BW9 452 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 APOL4Q9BPW4 351 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 TMEM106CQ9BVX2 250 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 SLC6A16Q9GZN6 736 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 CERS4Q9HA82 394 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 MYNNQ9NPC7 610 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PADI2Q9Y2J8 665 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 NUP210Q8TEM1 1887 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-201ENST00000343916 MUC22E2RYF6 1773 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PRAMEF25A6NGN4 478 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PI15O43692 258 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 NDUFS2O75306 463 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 BCAS1O75363 584 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-201ENST00000343916 INHBBP09529 407 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PSMB5P28074 263 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 CHI3L1P36222 383 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-201ENST00000343916 CD97P48960 835 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 AMZ2Q86W34 360 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 OR52N2Q8NGI0 321 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 SUSD6Q92537 303 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 RAD51AP1Q96B01 352 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 COX4I2Q96KJ9 171 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 KCNC2Q96PR1 638 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 C1GALT1Q9NS00 363 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 PCDHGA10Q9Y5H3 936 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 LYVE1Q9Y5Y7 322 aa18.52■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF99A8MXY4 864 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 C5orf67F2Z3F1 127 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 VEGFDO43915 354 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 PCDHGA12O60330 932 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 TBX6O95947 436 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 FUT4P22083 530 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 BMXP51813 675 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 MAD2L1BPQ15013 274 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 TMEM52BQ4KMG9 183 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 GCNT6Q5T4J0 391 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 GET4Q7L5D6 327 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 PDZD3Q86UT5 571 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 FAM129CQ86XR2 697 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 SMARCD2Q92925 531 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 EPYCQ99645 322 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 ABCG4Q9H172 646 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 PRSS16Q9NQE7 514 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 MIEF1Q9NQG6 463 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 RLIMQ9NVW2 624 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 CUEDC1Q9NWM3 386 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 TAS2R9Q9NYW1 312 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 HCN2Q9UL51 889 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 SNX8Q9Y5X2 465 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 A0A1W2PRB8 838 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 IGLON5A6NGN9 336 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 J3KTA2 159 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 CBFA2T3O75081 653 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 RB1P06400 928 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 OCM2P0CE71 109 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 OCMP0CE72 109 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 KRT20P35900 424 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 PIK3CBP42338 1070 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 WASP42768 502 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 DGCR6Q14129 220 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 EIF4HQ15056 248 aaKnown RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 TSPYL5Q86VY4 417 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-201ENST00000343916 FEVQ99581 238 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 DUSP21Q9H596 190 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 TAAR2Q9P1P5 351 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 PCDHGB3Q9Y5G1 929 aa18.51■□□□□ 0.55
COL9A3-201ENST00000343916 FEZF1A0PJY2 475 aa18.5■□□□□ 0.55
COL9A3-201ENST00000343916 TNFRSF11BO00300 401 aa18.5■□□□□ 0.55
COL9A3-201ENST00000343916 FADS2O95864 444 aaKnown RBP18.5■□□□□ 0.55
COL9A3-201ENST00000343916 JUNDP17535 347 aa18.5■□□□□ 0.55
COL9A3-201ENST00000343916 EN2P19622 333 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-201ENST00000343916 MASP1P48740 699 aa18.5■□□□□ 0.55
COL9A3-201ENST00000343916 LRRC74AQ0VAA2 488 aa18.5■□□□□ 0.55
COL9A3-201ENST00000343916 PSRC1Q6PGN9 363 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms