RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GRASPQ7Z6J2 395 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GPR135Q8IZ08 494 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FAM109AQ8N4B1 249 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 TMEM102Q8N9M5 508 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 KDM1BQ8NB78 822 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 RHEBL1Q8TAI7 183 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 PTERQ96BW5 349 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 UCK2Q9BZX2 261 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FAM120CQ9NX05 1096 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 EMCNQ9ULC0 261 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 NME4O00746 187 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 TSPAN6O43657 245 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 APOL3O95236 402 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SLC2A2P11168 524 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CSNK2A2P19784 350 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 RFC2P35250 354 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 MLLT1Q03111 559 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 LMAN2Q12907 356 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 RPA4Q13156 261 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CLCA4Q14CN2 919 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 RTP2Q5QGT7 225 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 PNCKQ6P2M8 343 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 PEG10Q86TG7 708 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 MARCH9Q86YJ5 346 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 OR5H6Q8NGV6 325 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ADAMTS16Q8TE57 1224 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SLC5A11Q8WWX8 675 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 PSMD9O00233 223 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 LEFTY1O75610 366 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CDRT1O95170 752 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GNRH1P01148 92 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 MT-ND2P03891 347 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 HYAL2Q12891 473 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 EFR3AQ14156 821 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ATAD3CQ5T2N8 411 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GJD3Q8N144 294 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 OR10H5Q8NGA6 315 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 KLHL6Q8WZ60 621 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SNAPC3Q92966 411 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF514Q96K75 400 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CTRCQ99895 268 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 NEURL2Q9BR09 285 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 IL1RAPQ9NPH3 570 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ARMC1Q9NVT9 282 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 IL37Q9NZH6 218 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ADAMTS5Q9UNA0 930 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 PCDHGB5Q9Y5G0 923 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 EEDO75530 441 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CAPN3P20807 821 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 CD72P21854 359 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 AHCYP23526 432 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 ACRV1P26436 265 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 AFF1P51825 1210 aaKnown RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 DCDC1P59894 354 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GABARAPL2P60520 117 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FAM189BP81408 668 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 TMEM115Q12893 351 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SLC36A3Q495N2 470 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 HSDL2Q6YN16 418 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 LINGO2Q7L985 606 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 NOXA1Q86UR1 476 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 LRRTM4Q86VH4 590 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SORCS1Q8WY21 1168 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GSDMCQ9BYG8 508 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 TTTY10Q9BZA0 68 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 KCNN2Q9H2S1 579 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SAV1Q9H4B6 383 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 GPN2Q9H9Y4 310 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FKBP14Q9NWM8 211 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 FAM118AQ9NWS6 357 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 MS4A12Q9NXJ0 267 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 TAS2R7Q9NYW3 318 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SPO11Q9Y5K1 396 aa7.78□□□□□ -1.16
UBE4B-202ENST00000343090 SLC1A7O00341 560 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 CLDN4O14493 209 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 STC2O76061 302 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 ZNF26P17031 533 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-202ENST00000343090 IL32P24001 234 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 AKT2P31751 481 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 ZXDBP98169 803 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 ID2Q02363 134 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 TOR1AIP1Q5JTV8 583 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 KANK2Q63ZY3 851 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 ARL9Q6T311 187 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 TMC8Q8IU68 726 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 APCDD1Q8J025 514 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 SPARTQ8N0X7 666 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 TCEANCQ8N8B7 351 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 OR4E2Q8NGC2 313 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 NKD1Q969G9 470 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 RNF31Q96EP0 1072 aa7.77□□□□□ -1.17
UBE4B-202ENST00000343090 KCTD7Q96MP8 289 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms