RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 MMP27Q9H306 513 aa23.02■■□□□ 1.28
NELFB-201ENST00000343053 SPG21Q9NZD8 308 aa23.02■■□□□ 1.28
NELFB-201ENST00000343053 GPC6Q9Y625 555 aaPredicted RBP23.02■■□□□ 1.28
NELFB-201ENST00000343053 DENND4CQ5VZ89 1909 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 HTR3EA5X5Y0 456 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 NPC1O15118 1278 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 TNFRSF21O75509 655 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 SOX14O95416 240 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 LRG1P02750 347 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 KLK1P06870 262 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 IGFBP1P08833 259 aaPredicted RBP23.01■■□□□ 1.27
NELFB-201ENST00000343053 GSTT2P0CG29 244 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 GSTT2BP0CG30 244 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 VIPR1P32241 457 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 RCVRNP35243 200 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 ZNF763Q0D2J5 394 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 TSTQ16762 297 aaKnown RBP23.01■■□□□ 1.27
NELFB-201ENST00000343053 SPIN4Q56A73 249 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 MED27Q6P2C8 311 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 AQP11Q8NBQ7 271 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 COQ8BQ96D53 544 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 ACAT2Q9BWD1 397 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 CPEB1Q9BZB8 566 aaKnown RBP23.01■■□□□ 1.27
NELFB-201ENST00000343053 C14orf119Q9NWQ9 140 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 CKAP5Q14008 2032 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 SERTM1A2A2V5 107 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 E9PQ18 207 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 KPNA5O15131 536 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 CTSLP07711 333 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 RGS6P49758 472 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 DEFB103AP81534 67 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 UAP1L1Q3KQV9 507 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 SLCO4C1Q6ZQN7 724 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 METTL3Q86U44 580 aaKnown RBP23.01■■□□□ 1.27
NELFB-201ENST00000343053 KIAA1958Q8N8K9 716 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 FCGR1BQ92637 280 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 TCEAL4Q96EI5 215 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 REEP4Q9H6H4 257 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 ANKMY1Q9P2S6 941 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 POFUT2Q9Y2G5 429 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 IFT52Q9Y366 437 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 KCNE2Q9Y6J6 123 aa23.01■■□□□ 1.27
NELFB-201ENST00000343053 XPAP23025 273 aaPredicted RBP23■■□□□ 1.27
NELFB-201ENST00000343053 HOXD12P35452 270 aa23■■□□□ 1.27
NELFB-201ENST00000343053 HNRNPFP52597 415 aaKnown RBP23■■□□□ 1.27
NELFB-201ENST00000343053 METAP1P53582 386 aa23■■□□□ 1.27
NELFB-201ENST00000343053 CDK6Q00534 326 aa23■■□□□ 1.27
NELFB-201ENST00000343053 PTGES3Q15185 160 aaKnown RBP23■■□□□ 1.27
NELFB-201ENST00000343053 DESI1Q6ICB0 168 aa23■■□□□ 1.27
NELFB-201ENST00000343053 LINC00299Q6ZSB3 139 aa23■■□□□ 1.27
NELFB-201ENST00000343053 CYP4Z2PQ8N1L4 340 aa23■■□□□ 1.27
NELFB-201ENST00000343053 PPCDCQ96CD2 204 aa23■■□□□ 1.27
NELFB-201ENST00000343053 ZNF556Q9HAH1 456 aa23■■□□□ 1.27
NELFB-201ENST00000343053 SIAEQ9HAT2 523 aa23■■□□□ 1.27
NELFB-201ENST00000343053 PLAGL1Q9UM63 463 aa23■■□□□ 1.27
NELFB-201ENST00000343053 CORO2BQ9UQ03 480 aa23■■□□□ 1.27
NELFB-201ENST00000343053 WDR37Q9Y2I8 494 aa23■■□□□ 1.27
NELFB-201ENST00000343053 RNASET2O00584 256 aaKnown RBP23■■□□□ 1.27
NELFB-201ENST00000343053 S100A5P33763 92 aa23■■□□□ 1.27
NELFB-201ENST00000343053 POLR2LP62875 67 aaKnown RBP23■■□□□ 1.27
NELFB-201ENST00000343053 SLC7A9P82251 487 aa23■■□□□ 1.27
NELFB-201ENST00000343053 TMEM115Q12893 351 aaPredicted RBP23■■□□□ 1.27
NELFB-201ENST00000343053 ZNF284Q2VY69 593 aa23■■□□□ 1.27
NELFB-201ENST00000343053 HENMT1Q5T8I9 393 aaKnown RBP23■■□□□ 1.27
NELFB-201ENST00000343053 SLC7A5P1Q8MH63 180 aa23■■□□□ 1.27
NELFB-201ENST00000343053 AMER2Q8N7J2 671 aa23■■□□□ 1.27
NELFB-201ENST00000343053 STARD8Q92502 1023 aa23■■□□□ 1.27
NELFB-201ENST00000343053 YIPF2Q9BWQ6 316 aa23■■□□□ 1.27
NELFB-201ENST00000343053 BRF2Q9HAW0 419 aa23■■□□□ 1.27
NELFB-201ENST00000343053 ATG13O75143 517 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 PPIBP23284 216 aaKnown RBP22.99■■□□□ 1.27
NELFB-201ENST00000343053 LRRC74AQ0VAA2 488 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 DUSP7Q16829 419 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 ATAD3BQ5T9A4 648 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 CFAP206Q8IYR0 622 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 IL17FQ96PD4 163 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 C5AR2Q9P296 337 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 GULP1Q9UBP9 304 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 SNPHO15079 494 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 GADD45GO95257 159 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 GABRB1P18505 474 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.276e-6■□□□□ 8.7
NELFB-201ENST00000343053 ATL1Q8WXF7 558 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 EXOSC4Q9NPD3 245 aaKnown RBP22.99■■□□□ 1.27
NELFB-201ENST00000343053 ACER3Q9NUN7 267 aa22.99■■□□□ 1.27
NELFB-201ENST00000343053 TRBC2A0A5B9 178 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 H3BM21 787 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 KIAA0513O60268 411 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 CYP7B1O75881 506 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 CKMT1AP12532 417 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 TYRP14679 529 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 TIMP2P16035 220 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 CNR2P34972 360 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 NR4A2P43354 598 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 TUBA1BP68363 451 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 ZDHHC20Q5W0Z9 365 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 TNFAIP8L2Q6P589 184 aaPredicted RBP22.98■■□□□ 1.27
NELFB-201ENST00000343053 KLHL17Q6TDP4 642 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 TUBA1AQ71U36 451 aa22.98■■□□□ 1.27
NELFB-201ENST00000343053 BCDIN3DQ7Z5W3 292 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms