RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PTCHD4Q6ZW05 846 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 MILR1Q7Z6M3 343 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 B3GALNT2Q8NCR0 500 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 CEP76Q8TAP6 659 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SCMH1Q96GD3 660 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ULBP1Q9BZM6 244 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF436Q9C0F3 470 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-201ENST00000342245 POLR2J2Q9GZM3 115 aaKnown RBP17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SAV1Q9H4B6 383 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-201ENST00000342245 FNIP2Q9P278 1114 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 RALGAPA2Q2PPJ7 1873 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 GBF1Q92538 1859 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 F8W036 122 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CBX4O00257 560 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 GJB1P08034 283 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 HOXC13P31276 330 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 TGM4P49221 684 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CLCN4P51793 760 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 ACLYP53396 1101 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 EPHA4P54764 986 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CLDN8P56748 225 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CACNB2Q08289 660 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-201ENST00000342245 IL18Q14116 193 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 USP39Q53GS9 565 aaKnown RBP17.8■□□□□ 0.44
SMPD1-201ENST00000342245 TRIM46Q7Z4K8 759 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 GOLGA7Q7Z5G4 137 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 KRTCAP2Q8N6L1 136 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 IL17RCQ8NAC3 791 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 RNF34Q969K3 372 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 YIPF5Q969M3 257 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 SIPA1Q96FS4 1042 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 OTUB1Q96FW1 271 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-201ENST00000342245 FZD3Q9NPG1 666 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CD93Q9NPY3 652 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 J3KR12 359 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 M0R233 179 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 CCL22O00626 93 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 KCNK5O95279 499 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 APOC1P02654 83 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 PNPLA4P41247 253 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 GTF2H2Q13888 395 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 FBXO47Q5MNV8 452 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 C9orf57Q5W0N0 161 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 GTF2H2CQ6P1K8 395 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 MZT2AQ6P582 158 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 BHLHB9Q6PI77 547 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 NANOGP1Q8N7R0 232 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 OR11H4Q8NGC9 324 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 NPAS1Q99742 590 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 GHITMQ9H3K2 345 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 SP110Q9HB58 689 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 SLC25A19Q9HC21 320 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 FAM50BQ9Y247 325 aa17.8■□□□□ 0.44
SMPD1-201ENST00000342245 YJEFN3A6XGL0 299 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 A8MXK9 166 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 OR7A17O14581 309 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 RFXANKO14593 260 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 SUV39H1O43463 412 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 BAG6P46379 1132 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 EVX1P49640 407 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 STK19P49842 368 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-201ENST00000342245 HK3P52790 923 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 IL2P60568 153 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ADAM15Q13444 863 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ZBTB6Q15916 424 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 TAF12Q16514 161 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 SIRPB2Q5JXA9 342 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF57Q68EA5 555 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-201ENST00000342245 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
SMPD1-201ENST00000342245 OR2T4Q8NH00 348 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 TMEM175Q9BSA9 504 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 RC3H2Q9HBD1 1191 aaKnown RBP17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ERAP1Q9NZ08 941 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 KCMF1Q9P0J7 381 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 SCP2D1Q9UJQ7 156 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 GSTK1Q9Y2Q3 226 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 PRPS2P11908 318 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 GPX2P18283 190 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 CD86P42081 329 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ERVFC1P60507 584 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 KCNJ10P78508 379 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 CLEC20AQ6ZU45 233 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 FAM46DQ8NEK8 389 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 OR11H7Q8NGC8 314 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ASIC4Q96FT7 647 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 PFDN2Q9UHV9 154 aa17.79■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF214Q9UL59 606 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-201ENST00000342245 SLC22A23A1A5C7 686 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 HBP1O60381 514 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 MAPKAPK2P49137 400 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 RPS14P62263 151 aaKnown RBP17.78■□□□□ 0.44
SMPD1-201ENST00000342245 CDH18Q13634 790 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 C3orf38Q5JPI3 329 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF648Q5T619 568 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-201ENST00000342245 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 CDH26Q8IXH8 852 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 NELL1Q92832 810 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 TPD52L3Q96J77 140 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 COQ10AQ96MF6 247 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms