RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ACTN3Q08043 901 aaPredicted RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 DLG1Q12959 904 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 RCN2Q14257 317 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 UAP1Q16222 522 aaPredicted RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 INAQ16352 499 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 C18orf21Q32NC0 220 aaPredicted RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 RPUSD3Q6P087 351 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 TRIM40Q6P9F5 258 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 LINC00696Q6ZRV3 163 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 LANCL3Q6ZV70 420 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 CENPLQ8N0S6 344 aaPredicted RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 SRFBP1Q8NEF9 429 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 OR2L5Q8NG80 312 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 SLC44A1Q8WWI5 657 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 EXT2Q93063 718 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ISL2Q96A47 359 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 MS4A6EQ96DS6 147 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 BARD1Q99728 777 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ROGDIQ9GZN7 287 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 REXO4Q9GZR2 422 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 PRDM9Q9NQV7 894 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ARGLU1Q9NWB6 273 aaPredicted RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 MAP10Q9P2G4 905 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF180Q9UJW8 692 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 TMCO1Q9UM00 188 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 COPG1Q9Y678 874 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 COL12A1Q99715 3063 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 SCN3AQ9NY46 2000 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 A0A096LPK6 155 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 HMX2A2RU54 273 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 UBXN8O00124 270 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 CDC123O75794 336 aaPredicted RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 KRT38O76015 456 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 SEC24DO94855 1032 aaPredicted RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ACSL3O95573 720 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 EPB42P16452 691 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 HNF4AP41235 474 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 GLRBP48167 497 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 KCNC1P48547 511 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 PIK3CGP48736 1102 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ALDH18A1P54886 795 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 OR4D2P58180 307 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 CHIT1Q13231 466 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 BMPR2Q13873 1038 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 DOC2AQ14183 400 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 BTBD16Q32M84 506 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 SFT2D3Q587I9 215 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 H3F3CQ6NXT2 135 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 PAPD4Q6PIY7 484 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 LGI4Q8N135 537 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 CISD2Q8N5K1 135 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 SIRT6Q8N6T7 355 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 C7orf57Q8NEG2 295 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 CCT6BQ92526 530 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 NXNL1Q96CM4 212 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF354BQ96LW1 612 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 KLHL31Q9H511 634 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 ABI3Q9P2A4 366 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 MRPS33Q9Y291 106 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 TNPO3Q9Y5L0 923 aaKnown RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
SIRPB3P-201ENST00000340424 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 SETXQ7Z333 2677 aaKnown RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 A0A087WUV0 522 aaPredicted RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 CLDN4O14493 209 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 B3GALT2O43825 422 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 KLK8O60259 260 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 UGDHO60701 494 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ABHD2P08910 425 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ITGAMP11215 1152 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 COL6A2P12110 1019 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 GFAPP14136 432 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 EPORP19235 508 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 MSH2P43246 934 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 MAGEA12P43365 314 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TNFSF10P50591 281 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TAS2R50P59544 299 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 OLR1P78380 273 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 BTN3A2P78410 334 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 SETDB1Q15047 1291 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TERF2Q15554 542 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TSNAXIP1Q2TAA8 658 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms