RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SHMT2P34897 504 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 KIR2DL1P43626 348 aaPredicted RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ESRRGP62508 458 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 DPTQ07507 201 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CDKL4Q5MAI5 379 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 GPR107Q5VW38 600 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 METRNLQ641Q3 311 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 DEF8Q6ZN54 512 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CEP68Q76N32 757 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 MEX3DQ86XN8 651 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 PTRH1Q86Y79 214 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 GTPBP3Q969Y2 492 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 HAUS8Q9BT25 410 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ROGDIQ9GZN7 287 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 SRMSQ9H3Y6 488 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CLK4Q9HAZ1 481 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 KCNK12Q9HB15 430 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 PAPOLBQ9NRJ5 636 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 FAM120CQ9NX05 1096 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 AHSPQ9NZD4 102 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 NEUROG3Q9Y4Z2 214 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 PCDHB11Q9Y5F2 797 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 A0A1W2PS29 197 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 B4DGG1 531 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 FAM227AF5H4B4 570 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ZW10O43264 779 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 MAGP20916 626 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 IGFBP5P24593 272 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 SCARB2Q14108 478 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 NHSL2Q5HYW2 709 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ATG9BQ674R7 924 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ABRAXAS1Q6UWZ7 409 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CEACAM20Q6UY09 585 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ADAMTSL4Q6UY14 1074 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CCDC116Q8IYX3 515 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 C11orf65Q8NCR3 313 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 MRGPRX1Q96LB2 322 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 OR2M4Q96R27 311 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ADPRHL2Q9NX46 363 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 DNAJB9Q9UBS3 223 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 PRSS38A1L453 326 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 HAT1O14929 419 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 KCNK5O95279 499 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 TFAP2AP05549 437 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 AGXTP21549 392 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 PTX3P26022 381 aaPredicted RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CERS1P27544 350 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 RRM2P31350 389 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CYBRD1Q53TN4 286 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ANXA8L1Q5VT79 327 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 TAF8Q7Z7C8 310 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ARL10Q8N8L6 244 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 CHTF18Q8WVB6 975 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 TFAP2CQ92754 450 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 UBE2E3Q969T4 207 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 TESCQ96BS2 214 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 NTN4Q9HB63 628 aa9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 DCAF13Q9NV06 445 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 SAMD4AQ9UPU9 718 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-202ENST00000340209 ACOX3O15254 700 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 CTSEP14091 401 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 RAB28P51157 221 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 RGNQ15493 299 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 PRSS53Q2L4Q9 553 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 CMPK2Q5EBM0 449 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 TOR1AIP1Q5JTV8 583 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 GCNT6Q5T4J0 391 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 KHDRBS2Q5VWX1 349 aaKnown RBP9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 RIMKLAQ8IXN7 391 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 ZZZ3Q8IYH5 903 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 KCT2Q8NC54 265 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 KCNC2Q96PR1 638 aa9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 FAM32AQ9Y421 112 aaKnown RBP9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 ARID1BQ8NFD5 2236 aaPredicted RBP9.71□□□□□ -0.85
RBFOX1-202ENST00000340209 FAM220BPB1ANY3 271 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 PDPK1O15530 556 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 SLC28A2O43868 658 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 NPPAP01160 153 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 NCBP2P52298 156 aaKnown RBP eCLIP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 BTN3A2P78410 334 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 ADAM15Q13444 863 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 MTSS1LQ765P7 747 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 ZNF765Q7L2R6 523 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 SGPP1Q9BX95 441 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 MRPS26Q9BYN8 205 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 MUC13Q9H3R2 512 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 C6orf106Q9H6K1 298 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 OLAHQ9NV23 265 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 DOLKQ9UPQ8 538 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 A0A1W2PQF6 199 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 TMPRSS11DO60235 418 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 CELA2BP08218 269 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 ALDH4A1P30038 563 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 DCTP40126 519 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 TPMTP51580 245 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms