RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 KLF2Q9Y5W3 355 aaPredicted RBP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 TCRBV16S1A1N1A0A5B0 115 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 CCDC188H7C350 402 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 MYO1DO94832 1006 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 TUBB4AP04350 444 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 SMSP52788 366 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 MLF1P58340 268 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 CDKL1Q00532 357 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 HSF1Q00613 529 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 SLC13A2Q13183 592 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 TMIGD1Q6UXZ0 262 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 BNC2Q6ZN30 1099 aaPredicted RBP18.19■□□□□ 0.5
ITGA4-202ENST00000339307 KRT78Q8N1N4 520 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 CPSF7Q8N684 471 aaKnown RBP18.19■□□□□ 0.5
ITGA4-202ENST00000339307 PYROXD1Q8WU10 500 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 RHOJQ9H4E5 214 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 CAB39LQ9H9S4 337 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 MOCS1Q9NZB8 636 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 WWOXQ9NZC7 414 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 ITPR2Q14571 2701 aa18.19■□□□□ 0.5
ITGA4-202ENST00000339307 TRBV11-1A0A0K0K1C0 115 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 ASPDHA6ND91 283 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 ANKDD1BA6NHY2 528 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 C4orf51C9J302 202 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 CLGNO14967 610 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 ERI3O43414 337 aaKnown RBP18.18■□□□□ 0.5
ITGA4-202ENST00000339307 ASNA1O43681 348 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 ZNF24P17028 368 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 RPL21P46778 160 aaKnown RBP18.18■□□□□ 0.5
ITGA4-202ENST00000339307 PLA2G16P53816 162 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 FBXO48Q5FWF7 155 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 XKRXQ6PP77 449 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 SNX31Q8N9S9 440 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 GAL3ST3Q96A11 431 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 RHBDF1Q96CC6 855 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 CHST11Q9NPF2 352 aa18.18■□□□□ 0.5
ITGA4-202ENST00000339307 A0A088AWK7 358 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 CLDN4O14493 209 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 NME2P1O60361 137 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 SMIM10L1P0DMW3 83 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 COX6B1P14854 86 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 ZNF10P21506 573 aaPredicted RBP18.17■□□□□ 0.5
ITGA4-202ENST00000339307 NME2P22392 152 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 CLCN2P51788 898 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 SLCO4C1Q6ZQN7 724 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 KLHDC8AQ8IYD2 350 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 GHDCQ8N2G8 530 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 TMEM156Q8N614 296 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 FAM47BQ8NA70 645 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 NFAM1Q8NET5 270 aaPredicted RBP18.17■□□□□ 0.5
ITGA4-202ENST00000339307 TTLQ8NG68 377 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 SREK1Q8WXA9 508 aaKnown RBP18.17■□□□□ 0.5
ITGA4-202ENST00000339307 CDKL2Q92772 493 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 SMIM10Q96HG1 83 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 DPH5Q9H2P9 285 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 SAYSD1Q9NPB0 183 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 PRTFDC1Q9NRG1 225 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 MTO1Q9Y2Z2 717 aaKnown RBP18.17■□□□□ 0.5
ITGA4-202ENST00000339307 MYO9AB2RTY4 2548 aa18.17■□□□□ 0.5
ITGA4-202ENST00000339307 IGKV3D-11A0A0A0MRZ8 115 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 B3GALT2O43825 422 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CCDC166P0CW27 439 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 SSTR1P30872 391 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 HNRNPH1P31943 449 aaKnown RBP18.16■□□□□ 0.5
ITGA4-202ENST00000339307 RFC3P40938 356 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 HLCSP50747 726 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
ITGA4-202ENST00000339307 ADORA2A-AS1P86434 159 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 POU4F1Q01851 419 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CALCOCO2Q13137 446 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 RUNX2Q13950 521 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 TGFBIQ15582 683 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 C3P1Q6ZMU1 363 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CLNKQ7Z7G1 428 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 GPSM1Q86YR5 675 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 BBOF1Q8ND07 529 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 B3GNT7Q8NFL0 401 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 EXT2Q93063 718 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 ESAMQ96AP7 390 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 MS4A6EQ96DS6 147 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 TSPAN17Q96FV3 270 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CCDC77Q9BR77 488 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CAPS2Q9BXY5 557 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 AICDAQ9GZX7 198 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CNOT10Q9H9A5 744 aaKnown RBP18.16■□□□□ 0.5
ITGA4-202ENST00000339307 COPS7BQ9H9Q2 264 aaPredicted RBP18.16■□□□□ 0.5
ITGA4-202ENST00000339307 POPDC3Q9HBV1 291 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 CD274Q9NZQ7 290 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 MMACHCQ9Y4U1 282 aa18.16■□□□□ 0.5
ITGA4-202ENST00000339307 LRIT2A6NDA9 550 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 E7ESA3 106 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 TFECO14948 347 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 PHGDHO43175 533 aaKnown RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 S100BP04271 92 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 IFNA16P05015 189 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 SLC6A12P48065 614 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 HSPA7P48741 367 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 MEOX1P50221 254 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 ZNF630Q2M218 657 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 XKR6Q5GH73 641 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms