RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PCDHGB4Q9UN71 923 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 TDRD6O60522 2096 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 STK25O00506 426 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 GPR37L1O60883 481 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF217O75362 1048 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 CHRNB3Q05901 458 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ADRM1Q16186 407 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 OR4C11Q6IEV9 310 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ISLR2Q6UXK2 745 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF793Q6ZN11 406 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 IKBIPQ70UQ0 350 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF761Q86XN6 746 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 PTOV1Q86YD1 416 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ZZZ3Q8IYH5 903 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 MAL2Q969L2 176 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 KLHDC7BQ96G42 594 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 VPS50Q96JG6 964 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 DCAF13Q9NV06 445 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 GSAPA4D1B5 854 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 OR6C74A6NCV1 312 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 VIPP01282 170 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 RAP2AP10114 183 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 CTSEP14091 401 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 SSR2P43308 183 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 LRRC23Q53EV4 343 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF425Q6IV72 752 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 DGLUCYQ7Z3D6 616 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 GATA6Q92908 595 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 RAPGEFL1Q9UHV5 662 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 PCDHGB5Q9Y5G0 923 aa21.37■■□□□ 1.01
PDLIM2-203ENST00000339162 A0A1W2PRB8 838 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 WASHC1A8K0Z3 465 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 ERI3O43414 337 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 LDLRP01130 860 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 FCGR1AP12314 374 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 DDCP20711 480 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 RPL3P39023 403 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 GK3PQ14409 553 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 ATP6AP1Q15904 470 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 VMACQ2NL98 169 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 COX20Q5RI15 118 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 NAGSQ8N159 534 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 TTLQ8NG68 377 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 MTERF3Q96E29 417 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 SLC47A1Q96FL8 570 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 SLC35A5Q9BS91 424 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 GSDMCQ9BYG8 508 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 GPATCH2Q9NW75 528 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 CPNE7Q9UBL6 633 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF282Q9UDV7 671 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 CNOT11Q9UKZ1 510 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 PCDHGA4Q9Y5G9 962 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 LAMA1P25391 3075 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 TOR1BO14657 336 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 ZCCHC18P0CG32 403 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 MAGP20916 626 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 STARD6P59095 220 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 RGNQ15493 299 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 ZIC1Q15915 447 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 FAM47BQ8NA70 645 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 FLVCR1-AS1Q8TAF5 88 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 MS4A6EQ96DS6 147 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 UGT2B28Q9BY64 529 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 SLAMF7Q9NQ25 335 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 AP1M2Q9Y6Q5 423 aa21.36■■□□□ 1.01
PDLIM2-203ENST00000339162 MDC1Q14676 2089 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 NDUFS2O75306 463 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 PRKRAO75569 313 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 CCNDBP1O95273 360 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 CRATP43155 626 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 RAB8AP61006 207 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 TJAP1Q5JTD0 557 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 OR8K5Q8NH50 307 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 SLC37A2Q8TED4 501 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 EXOSC8Q96B26 276 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 CNBD2Q96M20 576 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 QRFPRQ96P65 431 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 OR2A14Q96R47 310 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 DDX31Q9H8H2 851 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 GPR27Q9NS67 375 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 TAS2R9Q9NYW1 312 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 WNT16Q9UBV4 365 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 SNX7Q9UNH6 387 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 SNX11Q9Y5W9 270 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 RNF103-CHMP3A0A140T963 221 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 ZW10O43264 779 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 RETP07949 1114 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 SOAT1P35610 550 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 BLMHQ13867 455 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 MAP7Q14244 749 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 HEPACAMQ14CZ8 416 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 PDK3Q15120 406 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 TOR1AIP1Q5JTV8 583 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 PPP4R4Q6NUP7 873 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 GOT1L1Q8NHS2 421 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF597Q96LX8 424 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 TRIM4Q9C037 500 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 RAB26Q9ULW5 256 aa21.35■■□□□ 1.01
PDLIM2-203ENST00000339162 SNX8Q9Y5X2 465 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms