RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TLR4O00206 839 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ARHGAP33O14559 1287 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CDK1P06493 297 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ANXA8P13928 327 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CSNK1DP48730 415 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 GAB1Q13480 694 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 RGNQ15493 299 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 IRAK1BP1Q5VVH5 260 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 HIST2H2AA3Q6FI13 130 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TRIM40Q6P9F5 258 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 LHFPL3Q86UP9 236 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 COQ8BQ96D53 544 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 WACQ9BTA9 647 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TRIM45Q9H8W5 580 aaPredicted RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ZDHHC4Q9NPG8 344 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 SERHLQ9NQF3 203 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 B4GALT6Q9UBX8 382 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CLEC4EQ9ULY5 219 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 NME6O75414 186 aaPredicted RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 RORCP51449 518 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 SLBPQ14493 270 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CEACAM20Q6UY09 585 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 MMP21Q8N119 569 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 OR8H1Q8NGG4 311 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 HUS1BQ8NHY5 278 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 IL17FQ96PD4 163 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 HTATIP2Q9BUP3 242 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 MOV10Q9HCE1 1003 aaKnown RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 SEC14L3Q9UDX4 400 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 MUTYHQ9UIF7 546 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 NDRG4Q9ULP0 352 aaKnown RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 YARS2Q9Y2Z4 477 aaKnown RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CKAP5Q14008 2032 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 PLK4O00444 970 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 SLC16A8O95907 504 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 URODP06132 367 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TIE1P35590 1138 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ETV3P41162 512 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 SNRPD1P62314 119 aaKnown RBP13.59□□□□□ -0.23
PCDH8-201ENST00000338862 HBA1P69905 142 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 RNF180Q86T96 592 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 DOK4Q8TEW6 326 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TRIB2Q92519 343 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 TTTY10Q9BZA0 68 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 ZDHHC3Q9NYG2 299 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 NLKQ9UBE8 527 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 RLFQ13129 1914 aa13.58□□□□□ -0.23
PCDH8-201ENST00000338862 A0A1W2PRB8 838 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 IFNA14P01570 189 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 NR2F1P10589 423 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CKBP12277 381 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 HTR2BP41595 481 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CNTN1Q12860 1018 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 DCST1Q5T197 706 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 PIK3R3Q92569 461 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CTRCQ99895 268 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 HOXD1Q9GZZ0 328 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 OSGEPL1Q9H4B0 414 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 MKLN1Q9UL63 735 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 POFUT2Q9Y2G5 429 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 ZNF646O15015 1829 aaPredicted RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 A0A1W2PQ72 361 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 A0A1W2PQL4 384 aaPredicted RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TMEM202A6NGA9 273 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TSPAN6O43657 245 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 SERPINI2O75830 405 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CD70P32970 193 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 GGT2P36268 569 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 RPS19P39019 145 aaKnown RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 PRKCZQ05513 592 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 KIAA1161Q6NSJ0 714 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TTC23LQ6PF05 361 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CBLL1Q75N03 491 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 SLC46A3Q7Z3Q1 461 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
PCDH8-201ENST00000338862 COL26A1Q96A83 441 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TMCO6Q96DC7 493 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 TM9SF2Q99805 663 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 SLC29A3Q9BZD2 475 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 PSORS1C1Q9UIG5 152 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
PCDH8-201ENST00000338862 MEIOCA2RUB1 952 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 ISPDA4D126 451 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 DNAJB5O75953 348 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms