RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 UBE2QL1A1L167 161 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 METTL15A6NJ78 407 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 PI15O43692 258 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 DNAJB1P25685 340 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 RYKP34925 604 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 SERINC3Q13530 473 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 GPR19Q15760 415 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 HKDC1Q2TB90 917 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 TXNDC8Q6A555 127 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 KCTD20Q7Z5Y7 419 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 TP53INP2Q8IXH6 220 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 FAM98AQ8NCA5 519 aaKnown RBP15.51■□□□□ 0.07
NPHP3-201ENST00000337331 SETD6Q8TBK2 473 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 RANBP3Q9H6Z4 567 aaPredicted RBP15.51■□□□□ 0.07
NPHP3-201ENST00000337331 IFT46Q9NQC8 304 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 GPR83Q9NYM4 423 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 SLAMF8Q9P0V8 285 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF282Q9UDV7 671 aaPredicted RBP15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 LRRC14BA6NHZ5 514 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 GMDSO60547 372 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 SCN2BO60939 215 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 CLDN7O95471 211 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 CKMT1AP12532 417 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ANXA8P13928 327 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ENGP17813 658 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 HNMTP50135 292 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 TSPAN5P62079 268 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 SOX4Q06945 474 aaPredicted RBP15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF678Q5SXM1 525 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 B3GNT8Q7Z7M8 397 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 C2orf15Q8WU43 125 aaKnown RBP15.51■□□□□ 0.07
NPHP3-201ENST00000337331 PPP1R14AQ96A00 147 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 COQ8BQ96D53 544 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 RBCK1Q9BYM8 510 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 CD93Q9NPY3 652 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 FBXW2Q9UKT8 454 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF451Q9Y4E5 1061 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 DNAJC15Q9Y5T4 150 aa15.51■□□□□ 0.07
NPHP3-201ENST00000337331 IRGMA1A4Y4 181 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 TEX46H3BTG2 121 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 L7N2F9 121 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 FKTNO75072 461 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 TGFB1P01137 390 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ANXA3P12429 323 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 PSMD8P48556 350 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 C10orf62Q5T681 223 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 XAF1Q6GPH4 301 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 CXorf57Q6NSI4 855 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 CREB3L2Q70SY1 520 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 RGL4Q8IZJ4 473 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ADGRG2Q8IZP9 1017 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 CEP76Q8TAP6 659 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 CD99L2Q8TCZ2 262 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ZDHHC3Q9NYG2 299 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 HCN2Q9UL51 889 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SCML2Q9UQR0 700 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 A0A1W2PRB8 838 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SCAMP1O15126 338 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 IFNGP01579 166 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 TPMTP51580 245 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 GANABQ14697 944 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 DUSP7Q16829 419 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 PSRC1Q6PGN9 363 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 OR10G2Q8NGC3 310 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 NSUN5Q96P11 429 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF416Q9BWM5 594 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 RNF167Q9H6Y7 350 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 B3GNT2Q9NY97 397 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 TSC22D1Q15714 1073 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 KRT77Q7Z794 578 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 LSMEM2Q8N112 164 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF433Q8N7K0 673 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SCRN2Q96FV2 425 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ZFP3Q96NJ6 502 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 UHRF1Q96T88 793 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 DERL2Q9GZP9 239 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ZCCHC3Q9NUD5 404 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 MRPS33Q9Y291 106 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SPIN1Q9Y657 262 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 A0A1W2PRU2 124 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SSX4O60224 188 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SSX5O60225 188 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 MPZL2O60487 215 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 HCN1O60741 890 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SLC22A5O76082 557 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 PAPSS2O95340 614 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 SNAI1O95863 264 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 LARS2Q15031 903 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 AGMOQ6ZNB7 445 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 RTL4Q6ZR62 310 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 PM20D2Q8IYS1 436 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 C1orf52Q8N6N3 182 aaKnown RBP15.5■□□□□ 0.07
NPHP3-201ENST00000337331 PNPLA1Q8N8W4 532 aa15.5■□□□□ 0.07
NPHP3-201ENST00000337331 ARNTL2Q8WYA1 636 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms