RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 LIPKQ5VXJ0 399 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 KIAA1614Q5VZ46 1190 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 USP30Q70CQ3 517 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 MTSS1LQ765P7 747 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 COMMD6Q7Z4G1 85 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ZNF761Q86XN6 746 aaPredicted RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 TMEM126BQ8IUX1 230 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 UXS1Q8NBZ7 420 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 FAM129BQ96TA1 746 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ABCG4Q9H172 646 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 POLR2J3Q9H1A7 115 aaKnown RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 KCNH6Q9H252 994 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 POPDC3Q9HBV1 291 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ADAP2Q9NPF8 381 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DCAF13Q9NV06 445 aaKnown RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 PAK1IP1Q9NWT1 392 aaPredicted RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 PAPPA2Q9BXP8 1791 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 MIA3Q5JRA6 1907 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 LOC285556D6RIA3 1793 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CBFA2T3O75081 653 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 VNN2O95498 520 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CR2P20023 1033 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SOX3P41225 446 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SOX9P48436 509 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 MVKQ03426 396 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FOXM1Q08050 763 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 NNATQ16517 81 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SLC5A12Q1EHB4 618 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CCSAPQ6IQ19 270 aaPredicted RBP7.9□□□□□ -1.14
HPS4-201ENST00000336873 HACD2Q6Y1H2 254 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 LHFPL3Q86UP9 236 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SCML4Q8N228 414 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SVOPLQ8N434 492 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 OR8J3Q8NGG0 315 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 HDHD2Q9H0R4 259 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 OR51V1Q9H2C8 321 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CLN6Q9NWW5 311 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 NKIRAS2Q9NYR9 191 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 ZNF510Q9Y2H8 683 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 PCDHGB3Q9Y5G1 929 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 DNAJC13O75165 2243 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FAM92AA1XBS5 289 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FUOMA2VDF0 154 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 GRXCR1A8MXD5 290 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 ERI3O43414 337 aaKnown RBP7.9□□□□□ -1.14
HPS4-201ENST00000336873 PLOD3O60568 738 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CDC123O75794 336 aaPredicted RBP7.9□□□□□ -1.14
HPS4-201ENST00000336873 CCNKO75909 580 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CD160O95971 181 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 OR12D1P0DN82 309 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CCL5P13501 91 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FPR1P21462 350 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 CAV3P56539 151 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 PPIGQ13427 754 aaKnown RBP eCLIP7.9□□□□□ -1.141e-8■■■□□ 15.2
HPS4-201ENST00000336873 C1DQ13901 141 aaKnown RBP7.9□□□□□ -1.14
HPS4-201ENST00000336873 PYDC2Q56P42 97 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 DCST1Q5T197 706 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 AFMIDQ63HM1 303 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 SLC8B1Q6J4K2 584 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FAM131AQ6UXB0 335 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 C16orf62Q7Z3J2 963 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 PRSS58Q8IYP2 241 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D15Q8TC07 691 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 MYDGFQ969H8 173 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 GLYATL1Q969I3 302 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 DIRAS2Q96HU8 199 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 ALPK1Q96QP1 1244 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 TMEM245Q9H330 911 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 MAT2BQ9NZL9 334 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FNIP2Q9P278 1114 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 ABCD2Q9UBJ2 740 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 IL36AQ9UHA7 158 aa7.9□□□□□ -1.14
HPS4-201ENST00000336873 FADS2P1A8MWK0 482 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 M0R3H8 397 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 IFNA14P01570 189 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 CAPNS1P04632 268 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 MYL12AP19105 171 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 TCEA1P23193 301 aaKnown RBP7.9□□□□□ -1.15
HPS4-201ENST00000336873 DNAJB1P25685 340 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 TGM4P49221 684 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 ERVFC1P60507 584 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 KCNC4Q03721 635 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 MOGQ16653 247 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 UGT8Q16880 541 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 ZNF750Q32MQ0 723 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 CRB2Q5IJ48 1285 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 ALG1LQ6GMV1 187 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 KIAA1324Q6UXG2 1013 aaKnown RBP7.9□□□□□ -1.15
HPS4-201ENST00000336873 BEND5Q7L4P6 421 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 KRT74Q7RTS7 529 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 B3GNT8Q7Z7M8 397 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 AMZ2Q86W34 360 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 ZNF683Q8IZ20 524 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 RASGEF1AQ8N9B8 481 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 OR4E2Q8NGC2 313 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 BTN2A2Q8WVV5 523 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 CCM2Q9BSQ5 444 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.15
HPS4-201ENST00000336873 EHD1Q9H4M9 534 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 SYNDIG1Q9H7V2 258 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms