RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DAB2P98082 770 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 EIF2B5Q13144 721 aaKnown RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CCSMST1Q4G0I0 132 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 LGI4Q8N135 537 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CBARPQ8N350 705 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 PCNPQ8WW12 178 aaKnown RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 FOPNLQ96NB1 174 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 C14orf119Q9NWQ9 140 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 HSPE1-MOB4S4R3N1 261 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CHD5Q8TDI0 1954 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 NEDD8-MDP1E9PL57 170 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CATP04040 527 aaKnown RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 JUNDP17535 347 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CTRB1P17538 263 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 SPINT3P49223 89 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 PPP5CP53041 499 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 AP1S2P56377 157 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 RPS13P62277 151 aaKnown RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF267Q14586 743 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CTRB2Q6GPI1 263 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 CCDC71Q8IV32 467 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 NPAS3Q8IXF0 933 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 TRIM63Q969Q1 353 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF566Q969W8 418 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 TMEM202A6NGA9 273 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 KCNJ13O60928 360 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 WBP4O75554 376 aaKnown RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 GSTM1P09488 218 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 MADCAM1Q13477 382 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 PRSS36Q5K4E3 855 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF438Q7Z4V0 828 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 FAM109AQ8N4B1 249 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 L3MBTL4Q8NA19 623 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 LILRB1Q8NHL6 650 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 FYTTD1Q96QD9 318 aaKnown RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR51E2Q9H255 320 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 RLIMQ9NVW2 624 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 PCDHGB1Q9Y5G3 927 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 PFN3P60673 137 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 CD83Q01151 205 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 MEF2AQ02078 507 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ST3GAL4Q11206 333 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 RGNQ15493 299 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ARMCX4Q5H9R4 360 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 METTL2BQ6P1Q9 378 aaKnown RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 C22orf39Q6P5X5 142 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF366Q8N895 744 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR9Q2Q8NGE9 314 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 RHOXF1Q8NHV9 184 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 Q96MT0 163 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 DOHHQ9BU89 302 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 RIOK2Q9BVS4 552 aaKnown RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 NUAK2Q9H093 628 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 NAALAD2Q9Y3Q0 740 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 PCDHGA6Q9Y5G7 932 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 BACE2Q9Y5Z0 518 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 KCNE2Q9Y6J6 123 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC16A8O95907 504 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 IL1RNP18510 177 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ITGA1P56199 1179 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 POLR2LP62875 67 aaKnown RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF284Q2VY69 593 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 TPRG1LQ5T0D9 272 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 NFKBIDQ8NI38 313 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 LRRC20Q8TCA0 184 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF675Q8TD23 568 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 AIFM2Q9BRQ8 373 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 HMX1Q9NP08 348 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 TAS2R16Q9NYV7 291 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 INSL5Q9Y5Q6 135 aa15.86■□□□□ 0.13
CDC42EP4-201ENST00000335793 ADAMDEC1O15204 470 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TSPAN6O43657 245 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TLL1O43897 1013 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 MED26O95402 600 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ETHE1O95571 254 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 POP4O95707 220 aaKnown RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CD22P20273 847 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 IL32P24001 234 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 MC1RQ01726 317 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 C2orf80Q0P641 193 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TCTN1Q2MV58 587 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TBRG1Q3YBR2 411 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR8H2Q8N162 312 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 HUS1BQ8NHY5 278 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CD99L2Q8TCZ2 262 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 PHF10Q8WUB8 498 aaKnown RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR51B5Q9H339 312 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CPNE5Q9HCH3 593 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 COL4A4P53420 1690 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ARHGEF33A8MVX0 844 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 J3KTA2 159 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 C6orf47O95873 294 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 LRG1P02750 347 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 RPLP0P05388 317 aaKnown RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CLEC2LP0C7M8 214 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 WNT3P56703 355 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ALDH6A1Q02252 535 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms