RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 BBS1Q8NFJ9 593 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 OR52E4Q8NGH9 312 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SNX27Q96L92 541 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 GPR22Q99680 433 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PKP2Q99959 881 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TUT1Q9H6E5 874 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SIAEQ9HAT2 523 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MRPS30Q9NP92 439 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 DHDHQ9UQ10 334 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PLEKHM1Q9Y4G2 1056 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 E9PAM4 449 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 H0YGN5 161 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 BHLHE40O14503 412 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 WNT9AO14904 365 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 KIAA0513O60268 411 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 GOT2P00505 430 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 EBLN1P0CF75 366 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TFPIP10646 304 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 AMD1P17707 334 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PRKCHP24723 683 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MTPNP58546 118 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CRHR2Q13324 411 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 NAE1Q13564 534 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 DSC3Q14574 896 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SYNPOQ8N3V7 929 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 EXOSC8Q96B26 276 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 LGALS12Q96DT0 336 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TGM7Q96PF1 710 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 OPA3Q9H6K4 179 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 EQTNQ9NQ60 294 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MYH8P13535 1937 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 VTNP04004 478 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ALPPL2P10696 532 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CADM2Q8N3J6 435 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PPP1R13LQ8WUF5 828 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 FBXL20Q96IG2 436 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 FCRL5Q96RD9 977 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SLC32A1Q9H598 525 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 VPS29Q9UBQ0 182 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 FZD10Q9ULW2 581 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TVP23AA6NH52 213 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CLDN24A6NM45 220 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 FFAR2O15552 330 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 IRAK2O43187 625 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 RECQL4O94761 1208 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 AQP1P29972 269 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TGM4P49221 684 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CDH15P55291 814 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SLC26A5P58743 744 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MRPS6P82932 125 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 RAB40BQ12829 278 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 AARDQ4LEZ3 155 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SPIN3Q5JUX0 258 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 LRRC28Q86X40 367 aaPredicted RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ESX1Q8N693 406 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 DNAAF1Q8NEP3 725 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 STK35Q8TDR2 534 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 C7orf43Q8WVR3 580 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF668Q96K58 619 aaPredicted RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ALPK1Q96QP1 1244 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 G6PC3Q9BUM1 346 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ASAH2Q9NR71 780 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MRPL17Q9NRX2 175 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 MT-ND1P03886 318 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 AKAIN1P0CW23 69 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF35P13682 527 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ADORA2AP29274 412 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 AKT2P31751 481 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ACTR1BP42025 376 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 IDH3GP51553 393 aaPredicted RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SFT2D3Q587I9 215 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 NRROSQ86YC3 692 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SYT14Q8NB59 555 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 LFNGQ8NES3 379 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 RSC1A1Q92681 617 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM68Q96MH6 324 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 IL25Q9H293 177 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 A0A1W2PQ45 241 aaPredicted RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 A0A1W2PQY0 241 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 RNF212BA8MTL3 300 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ACOT7O00154 380 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SLC16A5O15375 505 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 JRKO75564 520 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 DBIP07108 87 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 LTKP29376 864 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 GPX6P59796 221 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CNTN2Q02246 1040 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 PON2Q15165 354 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 SLC36A3Q495N2 470 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 TMED4Q7Z7H5 227 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CMIPQ8IY22 773 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ANKRD53Q8N9V6 530 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms